Department of Bioscience, Biotechnologies and Biopharmaceutics and Centre of Excellence in Comparative Genomics, University of Bari "Aldo Moro", Bari, Italy.
Department of Bioscience, Biotechnologies and Biopharmaceutics and Centre of Excellence in Comparative Genomics, University of Bari "Aldo Moro", Bari, Italy; IRCCS "Casa Sollievo della Sofferenza", Research Hospital, San Giovanni Rotondo, Foggia, Italy.
Biochim Biophys Acta Biomembr. 2017 Mar;1859(3):368-376. doi: 10.1016/j.bbamem.2016.12.018. Epub 2016 Dec 24.
Aquaporin-4 (AQP4) is the CNS water channel organized into well-ordered protein aggregates called Orthogonal Arrays of Particles (OAPs). Neuromyelitis Optica (NMO) is an autoimmune disease caused by anti-OAP autoantibodies (AQP4-IgG). Molecular Dynamics (MD) simulations have identified an H-bond between L53 and T56 as the key for AQP4 epitope and therefore of potential interest for drug design in NMO field. In the present study, we have experimentally tested this MD-prediction using the classic mutagenesis approach. We substituted T56 with V56 and tested this mutant for AQP4 aggregates and AQP4-IgG binding. gSTED super-resolution microscopy showed that the mutation does not affect AQP4 aggregate dimension; immunofluorescence and cytofluorimetric analysis demonstrated its unaltered AQP4-IgG binding, therefore invalidating the MD-prediction. We later investigated whether AQP4, expressed in Sf9 insect and HEK-293F cells, is able to correctly aggregate before and after the purification steps usually applied to obtain AQP4 crystal. The results demonstrated that AQP4-IgG recognizes AQP4 expressed in Sf9 and HEK-293F cells by immunofluorescence even though BN-PAGE analysis showed that AQP4 forms smaller aggregates when expressed in insect cells compared to mammalian cell lines. Notably, after AQP4 purification, from both insect and HEK-293F cells, no aggregates are detectable by BN-PAGE and AQP4-IgG binding is impaired in sandwich ELISA assays. All together these results indicate that 1) the MD prediction under analysis is not supported by experimental data and 2) the procedure to obtain AQP4 crystals might affect its native architecture and, as a consequence, MD simulations. In conclusion, given the complex nature of the AQP4 epitope, MD might not be the suitable for molecular medicine advances in NMO.
水通道蛋白 4(AQP4)是一种中枢神经系统水通道,组织成有序的蛋白聚集体,称为正交颗粒阵列(OAPs)。视神经脊髓炎(NMO)是一种自身免疫性疾病,由抗 OAP 自身抗体(AQP4-IgG)引起。分子动力学(MD)模拟已经确定了 L53 和 T56 之间的氢键是 AQP4 表位的关键,因此对于 NMO 领域的药物设计具有潜在的兴趣。在本研究中,我们使用经典的诱变方法实验验证了这一 MD 预测。我们用 V56 取代 T56,并测试了该突变体的 AQP4 聚集体和 AQP4-IgG 结合情况。gSTED 超分辨率显微镜显示,该突变不影响 AQP4 聚集体的大小;免疫荧光和细胞荧光分析表明其 AQP4-IgG 结合未改变,因此否定了 MD 预测。后来我们研究了 Sf9 昆虫和 HEK-293F 细胞中表达的 AQP4 是否能够在通常用于获得 AQP4 晶体的纯化步骤前后正确聚集。结果表明,AQP4-IgG 通过免疫荧光识别 Sf9 和 HEK-293F 细胞中表达的 AQP4,尽管 BN-PAGE 分析表明,与哺乳动物细胞系相比,AQP4 在昆虫细胞中形成较小的聚集体。值得注意的是,在用昆虫和 HEK-293F 细胞纯化 AQP4 后,BN-PAGE 无法检测到聚集体,并且 sandwich ELISA 测定中 AQP4-IgG 的结合受到损害。所有这些结果表明,1)分析的 MD 预测未得到实验数据的支持,2)获得 AQP4 晶体的过程可能会影响其天然结构,进而影响 MD 模拟。总之,鉴于 AQP4 表位的复杂性,MD 可能不适合用于 NMO 的分子医学进展。