Banta Amy B, Wei Jeremy H, Gill Clare C C, Giner José-Luis, Welander Paula V
Department of Earth System Science, Stanford University, Stanford, CA 94305.
Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY 13210.
Proc Natl Acad Sci U S A. 2017 Jan 10;114(2):245-250. doi: 10.1073/pnas.1617231114. Epub 2016 Dec 27.
Cyclic triterpenoids are a broad class of polycyclic lipids produced by bacteria and eukaryotes. They are biologically relevant for their roles in cellular physiology, including membrane structure and function, and biochemically relevant for their exquisite enzymatic cyclization mechanism. Cyclic triterpenoids are also geobiologically significant as they are readily preserved in sediments and are used as biomarkers for ancient life throughout Earth's history. Isoarborinol is one such triterpenoid whose only known biological sources are certain angiosperms and whose diagenetic derivatives (arboranes) are often used as indicators of terrestrial input into aquatic environments. However, the occurrence of arborane biomarkers in Permian and Triassic sediments, which predates the accepted origin of angiosperms, suggests that microbial sources of these lipids may also exist. In this study, we identify two isoarborinol-like lipids, eudoraenol and adriaticol, produced by the aerobic marine heterotrophic bacterium Eudoraea adriatica Phylogenetic analysis demonstrates that the E. adriatica eudoraenol synthase is an oxidosqualene cyclase homologous to bacterial lanosterol synthases and distinct from plant triterpenoid synthases. Using an Escherichia coli heterologous sterol expression system, we demonstrate that substitution of four amino acid residues in a bacterial lanosterol synthase enabled synthesis of pentacyclic arborinols in addition to tetracyclic sterols. This variant provides valuable mechanistic insight into triterpenoid synthesis and reveals diagnostic amino acid residues to differentiate between sterol and arborinol synthases in genomic and metagenomic datasets. Our data suggest that there may be additional bacterial arborinol producers in marine and freshwater environments that could expand our understanding of these geologically informative lipids.
环状三萜是细菌和真核生物产生的一大类多环脂质。它们在细胞生理学中发挥作用,对细胞膜的结构和功能具有生物学意义,同时因其精妙的酶促环化机制而具有生物化学相关性。环状三萜在地质生物学上也具有重要意义,因为它们很容易保存在沉积物中,并被用作地球历史上古代生命的生物标志物。异乔木醇就是这样一种三萜,其已知的唯一生物来源是某些被子植物,其二成岩衍生物(乔木烷)常被用作陆地物质输入水生环境的指标。然而,在被子植物公认起源之前的二叠纪和三叠纪沉积物中出现了乔木烷生物标志物,这表明这些脂质可能也存在微生物来源。在本研究中,我们鉴定出两种类异乔木醇脂质,即优多拉烯醇和亚得里亚醇,它们由需氧海洋异养细菌亚得里亚优多拉菌产生。系统发育分析表明,亚得里亚优多拉菌的优多拉烯醇合酶是一种氧化角鲨烯环化酶,与细菌羊毛甾醇合酶同源,与植物三萜合酶不同。利用大肠杆菌异源甾醇表达系统,我们证明在细菌羊毛甾醇合酶中替换四个氨基酸残基,除了能合成四环甾醇外,还能合成五环乔木醇。这个变体为三萜合成提供了有价值的机制见解,并揭示了用于在基因组和宏基因组数据集中区分甾醇合酶和乔木醇合酶的诊断性氨基酸残基。我们的数据表明,海洋和淡水环境中可能存在其他产生乔木醇的细菌,这可能会拓宽我们对这些具有地质信息价值脂质的理解。