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地中海一种底栖八放珊瑚的遗传多样性对比水平:不同种群历史的影响?

Contrasted levels of genetic diversity in a benthic Mediterranean octocoral: Consequences of different demographic histories?

作者信息

Masmoudi Moutassem Billah, Chaoui Lamya, Topçu Nur Eda, Hammami Pachka, Kara Mohamed Hichem, Aurelle Didier

机构信息

Aix Marseille Univ Univ Avignon CNRS IRD IMBE Marseille France; Laboratoire Bioressources Marines Université d'Annaba Badji Mokhtar Annaba Algérie.

Laboratoire Bioressources Marines Université d'Annaba Badji Mokhtar Annaba Algérie.

出版信息

Ecol Evol. 2016 Oct 28;6(24):8665-8678. doi: 10.1002/ece3.2490. eCollection 2016 Dec.

Abstract

Understanding the factors explaining the observed patterns of genetic diversity is an important question in evolutionary biology. We provide the first data on the genetic structure of a Mediterranean octocoral, the yellow gorgonian , along with insights into the demographic history of this species. We sampled populations in four areas of the Mediterranean Sea: continental France, Algeria, Turkey, and the Balearic and Corsica islands. Along French coasts, three sites were sampled at two depths (20 and 40 m). We demonstrated a high genetic structure in this species (overall  = 0.13), and most pairwise differentiation tests were significant. We did not detect any difference between depths at the same site. Clustering analyses revealed four differentiated groups corresponding to the main geographical areas. The levels of allelic richness and heterozygosity were significantly different between regions, with highest diversity in Algeria and lowest levels in Turkey. The highest levels of private allelic richness were observed in Algeria followed by Turkey. Such contrasted patterns of genetic diversity were not observed in other Mediterranean octocorals and could be the result of different evolutionary histories. We also provide new empirical evidence of contrasting results between tests and model-based studies of demographic history. Our results have important consequences for the management of this species.

摘要

了解解释所观察到的遗传多样性模式的因素是进化生物学中的一个重要问题。我们提供了关于地中海八放珊瑚——黄柳珊瑚遗传结构的首批数据,以及对该物种种群历史的见解。我们在地中海的四个区域采集了样本:法国大陆、阿尔及利亚、土耳其以及巴利阿里群岛和科西嘉岛。在法国海岸,在两个深度(20米和40米)的三个地点进行了采样。我们证明了该物种具有高度的遗传结构(总体FST = 0.13),并且大多数成对分化测试都具有显著性。我们没有检测到同一地点不同深度之间的任何差异。聚类分析揭示了与主要地理区域相对应的四个分化群体。各区域之间的等位基因丰富度和杂合度水平存在显著差异,阿尔及利亚的多样性最高,土耳其的水平最低。在阿尔及利亚观察到的私有等位基因丰富度最高水平其次是土耳其。在其他地中海八放珊瑚中未观察到这种遗传多样性的对比模式,这可能是不同进化历史的结果。我们还为人口历史的测试和基于模型的研究之间的对比结果提供了新的实证证据。我们的结果对该物种的管理具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4720/5192949/068dc72cddc5/ECE3-6-8665-g001.jpg

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