Suppr超能文献

新热带区昆虫统计历史生物地理学中的模型选择——突眼象属复合体(象甲科:隐喙象亚科)

Model selection in statistical historical biogeography of Neotropical insects-The Exophthalmus genus complex (Curculionidae: Entiminae).

作者信息

Zhang Guanyang, Basharat Usmaan, Matzke Nicholas, Franz Nico M

机构信息

School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA.

School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA; Undergraduate Research Program (SOLUR), School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA.

出版信息

Mol Phylogenet Evol. 2017 Apr;109:226-239. doi: 10.1016/j.ympev.2016.12.039. Epub 2017 Jan 3.

Abstract

Statistical historical biogeographic methods rely on models that represent various biogeographic processes. Until recently model selection in this domain was not widely used, and the impact of differential model selection on inferring biogeographic scenarios was not well understood. Focusing on Neotropical weevils in the Exophthalmus genus complex (EGC) (Insecta: Curculionidae: Entiminae), we compare three commonly used biogeographic models - DIVA (Dispersal-Vicariance Analysis), DEC (Dispersal-Extinction-Cladogenesis) and BayArea (Bayesian Analysis of Biogeography), and examine the impact of modeling founder-event jump dispersal on historical biogeographic reconstructions. We also investigate the biogeographic events that have shaped patterns of distribution, diversification, and endemism in this weevil lineage. We sample representatives of 65 species of the EGC and 26 outgroup terminals from the Neotropics, including Caribbean islands and the mainland. We reconstruct a molecular phylogeny based on six genes and apply molecular dating using a relaxed clock with three fossil calibration points. Historical biogeographic estimations and alternative biogeographic models are computed and compared with the R package BioGeoBEARS. Model selection strongly favors biogeographic models that include founder-event jump dispersal. Without modeling jump dispersal, estimations based on the three biogeographic models are dramatically different, especially for early-diverging nodes. When jump dispersal is included, the three biogeographic models perform similarly. Accordingly, we show that the Neotropical mainland was colonized by Caribbean species in the early Miocene, and that in situ diversification accounts for a majority (∼75%) of the biogeographic events in the EGC. Our study highlights the need to assess wide-ranging historical biogeographic processes - including founder-event jump dispersal - for best-fitting statistical Caribbean biogeographic reconstructions. Moreover, colonization of the Neotropical mainland from the Caribbean reinforces the notion that islands can be an important source of continental diversity.

摘要

统计历史生物地理学方法依赖于代表各种生物地理过程的模型。直到最近,该领域的模型选择还未得到广泛应用,并且不同模型选择对推断生物地理情景的影响也未得到充分理解。以突眼象属复合体(EGC)(昆虫纲:象甲科:瘤象亚科)中的新热带区象鼻虫为研究对象,我们比较了三种常用的生物地理模型——DIVA(扩散-隔离分化分析)、DEC(扩散-灭绝-分支形成)和BayArea(生物地理学贝叶斯分析),并研究了对奠基者事件跳跃扩散进行建模对历史生物地理重建的影响。我们还调查了塑造该象鼻虫谱系分布、多样化和特有性模式的生物地理事件。我们从新热带区(包括加勒比群岛和大陆)选取了65种EGC的代表物种和26个外类群终端。我们基于六个基因重建了分子系统发育,并使用具有三个化石校准点的宽松分子钟进行分子定年。使用R包BioGeoBEARS计算并比较了历史生物地理估计值和替代生物地理模型。模型选择强烈支持包含奠基者事件跳跃扩散的生物地理模型。如果不考虑跳跃扩散进行建模,基于这三种生物地理模型的估计结果会有显著差异,尤其是对于早期分化的节点。当纳入跳跃扩散时,这三种生物地理模型的表现相似。因此,我们表明新热带区大陆在中新世早期被加勒比物种殖民,并且原地多样化占EGC生物地理事件的大部分(约75%)。我们的研究强调,为了进行最符合统计的加勒比生物地理重建,需要评估广泛的历史生物地理过程,包括奠基者事件跳跃扩散。此外,从加勒比地区向新热带区大陆的殖民强化了岛屿可以成为大陆多样性重要来源的观点。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验