Schwartz David A
AURORA, COLORADO.
Trans Am Clin Climatol Assoc. 2016;127:34-45.
Idiopathic pulmonary fibrosis (IPF) is a complex, heterogeneous genetic disorder that is associated with rare and common sequence variants in many genes (, , , , , and ), 11 novel loci, and multiple emerging epigenetic and transcriptional profiles. In the past 5 years, we have found that: 1) genetic risk variants play major and similar roles in the development of both familial and sporadic fibrotic idiopathic interstitial pneumonia, accounting for up to 35% of the risk of idiopathic interstitial pneumonia (a disease that was previously thought to be idiopathic); 2) a promoter variant in rs35705950 is the strongest risk factor for the development of IIP and IPF; however, rs35705950 has a low penetrance; and 3) IPF is a complex genetic disease with 11 independent loci contributing to the development of this disease, pronounced changes in DNA methylation, and transcriptional subtypes. In aggregate, these findings suggest that IPF is a heterogeneous disease and that genetic and molecular subtypes of IPF will provide essential clues to disease pathogenesis, prognosis, treatment, and survival, all of which remain major problems in understanding and treating patients with IPF. Although the basic biological mechanisms involved in IPF are emerging, the disease is heterogeneous pathologically and the final common pathways of fibrogenesis are not well understood. These observations lead us to postulate that the etiology and severity/extent of this complex condition will best be understood through an integrated approach that accounts for inherited factors, epigenetic marks, and dynamic changes in the transcriptome.
特发性肺纤维化(IPF)是一种复杂的、异质性的基因疾病,与许多基因(、、、、、和)中的罕见及常见序列变异、11个新基因座以及多种新出现的表观遗传和转录谱相关。在过去5年中,我们发现:1)遗传风险变异在家族性和散发性纤维化特发性间质性肺炎的发病过程中起主要且相似的作用,占特发性间质性肺炎(一种先前被认为是特发性的疾病)发病风险的35%;2)rs35705950中的一个启动子变异是IIP和IPF发病的最强风险因素;然而,rs35705950的外显率较低;3)IPF是一种复杂的基因疾病,有11个独立基因座促成该疾病的发生,DNA甲基化有显著变化,且存在转录亚型。总体而言,这些发现表明IPF是一种异质性疾病,IPF的遗传和分子亚型将为疾病的发病机制、预后、治疗及生存提供重要线索,而这些在理解和治疗IPF患者方面仍是主要问题。尽管IPF所涉及的基本生物学机制正在逐渐明晰,但该疾病在病理上具有异质性,纤维化形成的最终共同途径尚不清楚。这些观察结果使我们推测,通过综合考虑遗传因素、表观遗传标记和转录组动态变化的方法,将能最好地理解这种复杂病症的病因及严重程度/范围。