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欧洲山毛榉和挪威云杉林下土壤微生物群落的精细空间尺度变异

Fine Spatial Scale Variation of Soil Microbial Communities under European Beech and Norway Spruce.

作者信息

Nacke Heiko, Goldmann Kezia, Schöning Ingo, Pfeiffer Birgit, Kaiser Kristin, Castillo-Villamizar Genis A, Schrumpf Marion, Buscot François, Daniel Rolf, Wubet Tesfaye

机构信息

Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University Göttingen, Germany.

Department of Soil Ecology, UFZ-Helmholtz Centre for Environmental ResearchHalle, Germany; Department of Biology II, University of LeipzigLeipzig, Germany.

出版信息

Front Microbiol. 2016 Dec 22;7:2067. doi: 10.3389/fmicb.2016.02067. eCollection 2016.

Abstract

The complex interactions between trees and soil microbes in forests as well as their inherent seasonal and spatial variations are poorly understood. In this study, we analyzed the effects of major European tree species ( L. and (L.) Karst) on soil bacterial and fungal communities. Mineral soil samples were collected from different depths (0-10, 10-20 cm) and at different horizontal distances from beech or spruce trunks (0.5, 1.5, 2.5, 3.5 m) in early summer and autumn. We assessed the composition of soil bacterial and fungal communities based on 16S rRNA gene and ITS DNA sequences. Community composition of bacteria and fungi was most strongly affected by soil pH and tree species. Different ectomycorrhizal fungi (e.g., ) known to establish mutualistic associations with plant roots showed a tree species preference. Moreover, bacterial and fungal community composition showed spatial and seasonal shifts in soil surrounding beech and spruce. The relative abundance of saprotrophic fungi was higher at a depth of 0-10 vs. 10-20 cm depth. This was presumably a result of changes in nutrient availability, as litter input and organic carbon content decreased with soil depth. Overall bacterial community composition showed strong variations under spruce with increasing distance from the tree trunks, which might be attributed in part to higher fine root biomass near spruce trunks. Furthermore, overall bacterial community composition was strongly affected by season under deciduous trees.

摘要

森林中树木与土壤微生物之间复杂的相互作用,以及它们固有的季节和空间变化,目前还知之甚少。在本研究中,我们分析了欧洲主要树种(欧洲山毛榉和挪威云杉)对土壤细菌和真菌群落的影响。在初夏和秋季,从不同深度(0 - 10厘米、10 - 20厘米)以及距山毛榉或云杉树干不同水平距离(0.5米、1.5米、2.5米、3.5米)处采集矿质土壤样本。我们基于16S rRNA基因和ITS DNA序列评估土壤细菌和真菌群落的组成。细菌和真菌的群落组成受土壤pH值和树种的影响最大。已知与植物根系建立共生关系的不同外生菌根真菌(如某些种类)表现出对树种的偏好。此外,山毛榉和云杉周围土壤中的细菌和真菌群落组成呈现出空间和季节变化。腐生真菌在0 - 10厘米深度处的相对丰度高于10 - 20厘米深度处。这可能是养分有效性变化的结果,因为凋落物输入和有机碳含量随土壤深度而降低。总体而言,云杉林下细菌群落组成随距树干距离增加而呈现出强烈变化,这可能部分归因于云杉树干附近较高的细根生物量。此外,落叶林下细菌群落组成受季节影响强烈。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/367d/5177625/3345875c1256/fmicb-07-02067-g0001.jpg

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