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指导根和根瘤表达的顺式调控多基因座(PLETHORA)启动子元件在拟南芥和蒺藜苜蓿之间是保守的。

Cis-regulatory PLETHORA promoter elements directing root and nodule expression are conserved between Arabidopsis thaliana and Medicago truncatula.

作者信息

Franssen Henk J, Kulikova Olga, Willemsen Viola, Heidstra Renze

机构信息

a Department of Plant Sciences , Laboratory of Molecular Biology, Wageningen University , Wageningen , The Netherlands.

b Department of Plant Sciences , Plant Developmental Biology, Wageningen University , Wageningen , The Netherlands.

出版信息

Plant Signal Behav. 2017 Feb;12(2):e1278102. doi: 10.1080/15592324.2016.1278102.

DOI:10.1080/15592324.2016.1278102
PMID:28067580
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5351727/
Abstract

Nodules are unique organs formed on roots of legumes by soil-borne bacteria, collectively known as rhizobium. Recently, we have shown that orthologs of the AINTEGUMENTA-like (AIL) AP2 transcription factors PLETHORA (PLT) 1 to 4, that redundantly regulate Arabidopsis thaliana root development are involved in root and nodule growth in Medicago truncatula. Hence, it is conceivable that rhizobium has co-opted these genes for nodule development. Whether this co-option requires the presence of specific cis-elements in the promoters and/or specialization of PLT protein function is not clear. Here, we analyzed the qualitative expression patterns of the Arabidopsis PLT1 to 4 promoters in Medicago roots and nodules and compared these with the described expression patterns of the Medicago PLT genes. Our studies reveal that the expression patterns of the investigated promoters and their Medicago orthologs are very similar, indicating that at least all cis-elements regulating spatial PLT expression are conserved among the Arabidopsis and Medicago PLT1 to 4 promoters.

摘要

根瘤是由土壤细菌(统称为根瘤菌)在豆科植物根部形成的独特器官。最近,我们发现拟南芥中冗余调控根发育的类珠被(AIL)AP2转录因子多能性(PLT)1至4的直系同源基因参与了蒺藜苜蓿的根和根瘤生长。因此,可以推测根瘤菌已选择这些基因用于根瘤发育。这种选择是否需要启动子中存在特定的顺式元件和/或PLT蛋白功能的特化尚不清楚。在这里,我们分析了拟南芥PLT1至4启动子在苜蓿根和根瘤中的定性表达模式,并将其与已描述的苜蓿PLT基因的表达模式进行比较。我们的研究表明,所研究的启动子及其苜蓿直系同源基因的表达模式非常相似,这表明至少所有调控PLT空间表达的顺式元件在拟南芥和苜蓿PLT1至4启动子中是保守的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/96c8/5351727/a77aac21f1c0/kpsb-12-02-1278102-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/96c8/5351727/a77aac21f1c0/kpsb-12-02-1278102-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/96c8/5351727/a77aac21f1c0/kpsb-12-02-1278102-g001.jpg

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本文引用的文献

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Plant Cell. 2016 Dec;28(12):2937-2951. doi: 10.1105/tpc.16.00656. Epub 2016 Dec 5.
2
Genes conserved for arbuscular mycorrhizal symbiosis identified through phylogenomics.通过系统发生基因组学鉴定出与丛枝菌根共生关系保守的基因。
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Root developmental programs shape the Medicago truncatula nodule meristem.根发育程序塑造了蒺藜苜蓿根瘤分生组织。
Development. 2015 Sep 1;142(17):2941-50. doi: 10.1242/dev.120774. Epub 2015 Aug 7.
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Leguminous plants: inventors of root nodules to accommodate symbiotic bacteria.豆科植物:根瘤的创造者,用于容纳共生细菌。
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Fate map of Medicago truncatula root nodules.蒺藜苜蓿根瘤的细胞谱系图。
Development. 2014 Sep;141(18):3517-28. doi: 10.1242/dev.110775.
6
PLETHORA gradient formation mechanism separates auxin responses.多血症梯度形成机制分离生长素反应。
Nature. 2014 Nov 6;515(7525):125-129. doi: 10.1038/nature13663. Epub 2014 Aug 24.
7
Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution.比较系统发育基因组学揭示了共生关联对宿主基因组进化的影响。
PLoS Genet. 2014 Jul 17;10(7):e1004487. doi: 10.1371/journal.pgen.1004487. eCollection 2014 Jul.
8
An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing.利用激光捕获显微切割与 RNA 测序相结合的方法对共生根瘤中的植物和细菌基因表达进行综合分析。
Plant J. 2014 Mar;77(6):817-37. doi: 10.1111/tpj.12442. Epub 2014 Feb 24.
9
AINTEGUMENTA-LIKE proteins: hubs in a plethora of networks.无被膜蛋白:众多网络中的枢纽。
Trends Plant Sci. 2014 Mar;19(3):146-57. doi: 10.1016/j.tplants.2013.10.010. Epub 2013 Nov 24.
10
Wuschel-related homeobox5 gene expression and interaction of CLE peptides with components of the systemic control add two pieces to the puzzle of autoregulation of nodulation.Wuschel 相关同源盒 5 基因的表达以及 CLE 肽与系统调控成分的相互作用为根瘤菌结瘤的自身调控这一谜题增添了两部分内容。
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