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从基因组到蛋白质组:慢性淋巴细胞白血病中超越DNA和RNA的研究

From genome to proteome: Looking beyond DNA and RNA in chronic lymphocytic leukemia.

作者信息

Thurgood Lauren A, Chataway Tim K, Lower Karen M, Kuss Bryone J

机构信息

Department of Haematology and Genetic Pathology, Flinders University, Adelaide, South Australia, Australia.

Department of Physiology, Flinders University, Adelaide, South Australia, Australia.

出版信息

J Proteomics. 2017 Feb 23;155:73-84. doi: 10.1016/j.jprot.2017.01.001. Epub 2017 Jan 6.

DOI:10.1016/j.jprot.2017.01.001
PMID:28069558
Abstract

Chronic lymphocytic leukemia (CLL) remains the most common leukemia in the Western world. Whilst its disease course is extremely heterogeneous (ranging from indolent to aggressive), current methods are unable to accurately predict the clinical journey of each patient. There is clearly a pressing need for both improved prognostication and treatment options for patients with this disease. Whilst molecular studies have analyzed both genetic mutations and gene expression profiles of these malignant B-cells, and as a result have shed light on the pathogenesis of CLL, proteomic studies have been largely overlooked to date. This review summarizes our current knowledge of the proteomics of CLL, and discusses some of the issues in CLL proteomic research, such as reproducibility and data interpretation. In addition, we look ahead to how proteomics may significantly help in the development of a successful treatment for this currently incurable disease.

摘要

慢性淋巴细胞白血病(CLL)仍是西方世界最常见的白血病。尽管其病程极具异质性(从惰性到侵袭性不等),但目前的方法无法准确预测每位患者的临床进程。显然,迫切需要改善这种疾病患者的预后评估和治疗选择。虽然分子研究已经分析了这些恶性B细胞的基因突变和基因表达谱,从而揭示了CLL的发病机制,但蛋白质组学研究迄今为止在很大程度上被忽视了。本综述总结了我们目前对CLL蛋白质组学的认识,并讨论了CLL蛋白质组学研究中的一些问题,如可重复性和数据解读。此外,我们展望蛋白质组学如何能够显著助力针对这种目前无法治愈的疾病开发出成功的治疗方法。

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Cancers (Basel). 2021 Jul 6;13(14):3391. doi: 10.3390/cancers13143391.
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Assessing technical and biological variation in SWATH-MS-based proteomic analysis of chronic lymphocytic leukaemia cells.评估基于 SWATH-MS 的慢性淋巴细胞白血病细胞蛋白质组学分析中的技术和生物学变异性。
Sci Rep. 2021 Feb 3;11(1):2932. doi: 10.1038/s41598-021-82609-2.
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Proteomics Profiling of CLL Versus Healthy B-cells Identifies Putative Therapeutic Targets and a Subtype-independent Signature of Spliceosome Dysregulation.
慢性淋巴细胞白血病与健康 B 细胞的蛋白质组学分析鉴定出潜在的治疗靶点和剪接体失调的亚型非依赖性特征。
Mol Cell Proteomics. 2018 Apr;17(4):776-791. doi: 10.1074/mcp.RA117.000539. Epub 2018 Jan 24.
4
Proteomics and metabolomics identify molecular mechanisms of aging potentially predisposing for chronic lymphocytic leukemia.蛋白质组学和代谢组学鉴定潜在导致慢性淋巴细胞白血病的衰老的分子机制。
Mol Cell Proteomics. 2018 Feb;17(2):290-303. doi: 10.1074/mcp.RA117.000425. Epub 2017 Dec 1.