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坎宁安石龙子在其分布范围内显示出低遗传连通性和趋异选择的特征。

Cunningham's skinks show low genetic connectivity and signatures of divergent selection across its distribution.

作者信息

Ofori Benjamin Y, Beaumont Linda J, Stow Adam J

机构信息

Department of Biological Sciences Macquarie University North Ryde Macquarie Park NSW Australia; Department Animal Biology and Conservation Science University of Ghana Legon-Accra Ghana.

Department of Biological Sciences Macquarie University North Ryde Macquarie Park NSW Australia.

出版信息

Ecol Evol. 2016 Nov 29;7(1):48-57. doi: 10.1002/ece3.2627. eCollection 2017 Jan.

DOI:10.1002/ece3.2627
PMID:28070274
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5214970/
Abstract

Establishing corridors of connecting habitat has become a mainstay conservation strategy to maintain gene flow and facilitate climate-driven range shifts. Yet, little attention has been given to ascertaining the extent to which corridors will benefit philopatric species, which might exhibit localized adaptation. Measures of genetic connectivity and adaptive genetic variation across species' ranges can help fill this knowledge gap. Here, we characterized the spatial genetic structure of Cunningham's skink (), a philopatric species distributed along Australia's Great Dividing Range, and assessed evidence of localized adaptation. Analysis of 4,274 SNPs from 94 individuals sampled at four localities spanning 500 km and 4° of latitude revealed strong genetic structuring at neutral loci (mean  ±  = 0.603 ± 0.237) among the localities. Putatively neutral SNPs and those under divergent selection yielded contrasting spatial patterns, with the latter identifying two genetically distinct clusters. Given low genetic connectivity of the four localities, we suggest that the natural movement rate of this species is insufficient to keep pace with spatial shifts to its climate envelope, irrespective of habitat availability. In addition, our finding of localized adaptation highlights the risk of outbreeding depression should the translocation of individuals be adopted as a conservation management strategy.

摘要

建立连接栖息地的走廊已成为维持基因流动和促进气候驱动的范围转移的主要保护策略。然而,对于确定走廊将在多大程度上有利于恋巢性物种(可能表现出局部适应性),人们关注甚少。跨物种分布范围的遗传连通性和适应性遗传变异的测量有助于填补这一知识空白。在这里,我们描述了沿澳大利亚大分水岭分布的恋巢性物种坎宁安石龙子(Cunningham's skink)的空间遗传结构,并评估了局部适应性的证据。对来自跨越500公里和4个纬度的四个地点的94个个体的4274个单核苷酸多态性(SNP)进行分析,结果显示各地点之间在中性位点存在强烈的遗传结构(平均±=0.603±0.237)。假定的中性SNP和那些处于分歧选择下的SNP产生了截然不同的空间模式,后者识别出两个遗传上不同的聚类。鉴于这四个地点的遗传连通性较低,我们认为,无论栖息地是否可用,该物种的自然移动速度都不足以跟上其气候适应范围的空间变化。此外,我们关于局部适应性的发现凸显了如果将个体迁移作为保护管理策略,可能会出现远交衰退的风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/203f/5214970/2ebb96a15829/ECE3-7-48-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/203f/5214970/29b638cc6502/ECE3-7-48-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/203f/5214970/2ebb96a15829/ECE3-7-48-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/203f/5214970/29b638cc6502/ECE3-7-48-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/203f/5214970/2ebb96a15829/ECE3-7-48-g002.jpg

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本文引用的文献

1
ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.估计用于群体结构分析的F统计量
Evolution. 1984 Nov;38(6):1358-1370. doi: 10.1111/j.1558-5646.1984.tb05657.x.
2
Riverscape genomics of a threatened fish across a hydroclimatically heterogeneous river basin.跨水文气候异质流域的濒危鱼类的河流景观基因组学
Mol Ecol. 2016 Oct;25(20):5093-5113. doi: 10.1111/mec.13830. Epub 2016 Sep 17.
3
Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus).
适应能力对气候变化脆弱性评估结果的影响。
Sci Rep. 2017 Oct 11;7(1):12979. doi: 10.1038/s41598-017-13245-y.
4
Combining dispersal, landscape connectivity and habitat suitability to assess climate-induced changes in the distribution of Cunningham's skink, Egernia cunninghami.结合扩散、景观连通性和栖息地适宜性来评估气候导致的坎宁安氏石龙子(Egernia cunninghami)分布变化。
PLoS One. 2017 Sep 5;12(9):e0184193. doi: 10.1371/journal.pone.0184193. eCollection 2017.
海景基因组学为美洲龙虾(美洲螯龙虾)的热适应性和洋流介导的种群结构提供了证据。
Mol Ecol. 2016 Oct;25(20):5073-5092. doi: 10.1111/mec.13811. Epub 2016 Sep 16.
4
Artificial Selection Reveals High Genetic Variation in Phenology at the Trailing Edge of a Species Range.人工选择揭示了物种分布范围边缘物候的高遗传变异。
Am Nat. 2016 Feb;187(2):182-93. doi: 10.1086/684440. Epub 2015 Dec 30.
5
Detecting spatial genetic signatures of local adaptation in heterogeneous landscapes.在异质景观中检测局部适应性的空间遗传特征。
Mol Ecol. 2016 Jan;25(1):104-20. doi: 10.1111/mec.13476. Epub 2015 Dec 12.
6
Genetic subdivision and candidate genes under selection in North American grey wolves.北美灰狼的遗传细分及选择中的候选基因。
Mol Ecol. 2016 Jan;25(1):380-402. doi: 10.1111/mec.13364. Epub 2015 Nov 5.
7
Building evolutionary resilience for conserving biodiversity under climate change.在气候变化背景下构建生物多样性保护的进化适应力。
Evol Appl. 2011 Mar;4(2):326-37. doi: 10.1111/j.1752-4571.2010.00157.x. Epub 2010 Oct 18.
8
Conservation genomics of anadromous Atlantic salmon across its North American range: outlier loci identify the same patterns of population structure as neutral loci.北美洄游型大西洋鲑跨分布范围的保护基因组学:异常位点与中性位点识别出相同的种群结构模式。
Mol Ecol. 2014 Dec;23(23):5680-97. doi: 10.1111/mec.12972. Epub 2014 Nov 8.
9
A multi-locus molecular phylogeny for Australia's iconic Jacky Dragon (Agamidae: Amphibolurus muricatus): phylogeographic structure along the Great Dividing Range of south-eastern Australia.澳大利亚标志性的杰克龙(鬣蜥科: Amphibolurus muricatus)的多基因分子系统发育:澳大利亚东南部大分水岭的地理结构。
Mol Phylogenet Evol. 2014 Feb;71:149-56. doi: 10.1016/j.ympev.2013.11.012. Epub 2013 Dec 6.
10
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.