Wang Yi, Shen Yu, Liu Dongyang, Li Guoqin, Guo Zhe, Fan Yangyu, Niu Yilong
School of Electronics and Information, Northwestern Polytechnical University, Xi'an, 710072, China.
School of Marine Science and Technology, Northwestern Polytechnical University, Xi'an, 710072, China.
Biomed Eng Online. 2017 Jan 10;16(1):9. doi: 10.1186/s12938-016-0299-2.
Diffusion Tensor Magnetic Resonance Imaging (DT-MRI, also known as DTI) measures the diffusion properties of water molecules in tissues and to date is one of the main techniques that can effectively study the microstructures of the brain in vivo. Presently, evaluation of DTI registration techniques is still in an initial stage of development.
In this paper, six well-known open source DTI registration algorithms: Elastic, Rigid, Affine, DTI-TK, FSL and SyN were applied on 11 subjects from an open-access dataset, among which one was randomly chosen as the template. Eight different fiber bundles of 10 subjects and the template were obtained by drawing regions of interest (ROIs) around various structures using deterministic streamline tractography. The performances of the registration algorithms were evaluated by computing the distances and intersection angles between fiber tracts, as well as the fractional anisotropy (FA) profiles along the fiber tracts. Also, the mean squared error (MSE) and the residual MSE (RMSE) of fibers originating from the registered subjects and the template were calculated to assess the registration algorithm. Twenty-seven different fiber bundles of the 10 subjects and template were obtained by drawing ROIs around various structures using probabilistic tractography. The performances of registration algorithms on this second tractography method were evaluated by computing the spatial correlation similarity of the fibers between subjects as well as between each subject and the template.
All experimental results indicated that DTI-TK performed the best under the study conditions, and SyN ranked just behind it.
扩散张量磁共振成像(DT-MRI,也称为DTI)测量组织中水分子的扩散特性,是目前能够在体内有效研究脑微观结构的主要技术之一。目前,DTI配准技术的评估仍处于发展初期。
本文将六种著名的开源DTI配准算法:弹性算法、刚体算法、仿射算法、DTI-TK、FSL和SyN应用于一个开放获取数据集中的11名受试者,其中随机选择一名作为模板。通过使用确定性流线追踪法在各种结构周围绘制感兴趣区域(ROI),获得了10名受试者和模板的八个不同纤维束。通过计算纤维束之间的距离和相交角度,以及沿纤维束的分数各向异性(FA)分布,评估配准算法的性能。此外,还计算了来自配准受试者和模板的纤维的均方误差(MSE)和残余均方误差(RMSE),以评估配准算法。通过使用概率追踪法在各种结构周围绘制ROI,获得了10名受试者和模板的27个不同纤维束。通过计算受试者之间以及每个受试者与模板之间纤维的空间相关相似性,评估了配准算法在第二种追踪方法上的性能。
所有实验结果表明,在研究条件下DTI-TK表现最佳,SyN仅次于它。