Crépin Lucie, Truong Nhat My, Bloem Audrey, Sanchez Isabelle, Dequin Sylvie, Camarasa Carole
SPO, INRA, SupAgroM, Université de Montpellier, Montpellier, France.
SPO, INRA, SupAgroM, Université de Montpellier, Montpellier, France
Appl Environ Microbiol. 2017 Feb 15;83(5). doi: 10.1128/AEM.02617-16. Print 2017 Mar 1.
During fermentative growth in natural and industrial environments, must redistribute the available nitrogen from multiple exogenous sources to amino acids in order to suitably fulfill anabolic requirements. To exhaustively explore the management of this complex resource, we developed an advanced strategy based on the reconciliation of data from a set of stable isotope tracer experiments with labeled nitrogen sources. Thus, quantifying the partitioning of the N compounds through the metabolism network during fermentation, we demonstrated that, contrary to the generally accepted view, only a limited fraction of most of the consumed amino acids is directly incorporated into proteins. Moreover, substantial catabolism of these molecules allows for efficient redistribution of nitrogen, supporting the operative synthesis of proteinogenic amino acids. In contrast, catabolism of consumed amino acids plays a minor role in the formation of volatile compounds. Another important feature is that the α-keto acid precursors required for the syntheses originate mainly from the catabolism of sugars, with a limited contribution from the anabolism of consumed amino acids. This work provides a comprehensive view of the intracellular fate of consumed nitrogen sources and the metabolic origin of proteinogenic amino acids, highlighting a strategy of distribution of metabolic fluxes implemented by yeast as a means of adapting to environments with changing and scarce nitrogen resources. A current challenge for the wine industry, in view of the extensive competition in the worldwide market, is to meet consumer expectations regarding the sensory profile of the product while ensuring an efficient fermentation process. Understanding the intracellular fate of the nitrogen sources available in grape juice is essential to the achievement of these objectives, since nitrogen utilization affects both the fermentative activity of yeasts and the formation of flavor compounds. However, little is known about how the metabolism operates when nitrogen is provided as a composite mixture, as in grape must. Here we quantitatively describe the distribution through the yeast metabolic network of the N moieties and C backbones of these nitrogen sources. Knowledge about the management of a complex resource, which is devoted to improvement of the use of the scarce N nutrient for growth, will be useful for better control of the fermentation process and the sensory quality of wines.
在自然和工业环境中的发酵生长过程中,酵母必须将多种外源氮源中的可用氮重新分配到氨基酸中,以充分满足合成代谢的需求。为了全面探究这种复杂资源的管理方式,我们基于对一组使用标记氮源的稳定同位素示踪实验数据进行整合,开发了一种先进策略。通过量化发酵过程中氮化合物在代谢网络中的分配,我们发现,与普遍观点相反,大多数被消耗的氨基酸中只有一小部分直接掺入蛋白质中。此外,这些分子的大量分解代谢能够实现氮的有效重新分配,支持蛋白质ogenic氨基酸的有效合成。相比之下,被消耗氨基酸的分解代谢在挥发性化合物的形成中作用较小。另一个重要特征是,蛋白质ogenic氨基酸合成所需的α-酮酸前体主要来自糖类的分解代谢,被消耗氨基酸的合成代谢贡献有限。这项工作全面阐述了被消耗氮源的细胞内命运以及蛋白质ogenic氨基酸的代谢来源,突出了酵母实施的代谢通量分配策略,这是其适应氮资源变化和稀缺环境的一种方式。鉴于全球市场的激烈竞争,葡萄酒行业目前面临的一个挑战是在确保高效发酵过程的同时,满足消费者对产品感官特征的期望。了解葡萄汁中可用氮源的细胞内命运对于实现这些目标至关重要,因为氮的利用既影响酵母的发酵活性,也影响风味化合物的形成。然而,对于像葡萄汁那样以复合混合物形式提供氮时代谢如何运作,人们了解甚少。在这里,我们定量描述了这些氮源的氮部分和碳骨架在酵母代谢网络中的分布。关于这种复杂资源管理的知识,致力于改善对稀缺氮营养用于生长的利用,将有助于更好地控制发酵过程和葡萄酒的感官质量。