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热应激在转录和转录后水平调控基因表达,由[具体生物或组织]中的RNA测序揭示 。 (你提供的原文结尾处“in.”后面缺少具体内容)

Heat Stress Regulates the Expression of Genes at Transcriptional and Post-Transcriptional Levels, Revealed by RNA-seq in .

作者信息

Chen Shoukun, Li Haifeng

机构信息

State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F UniversityYangling, China; Xinjiang Agricultural Vocational Technical CollegeChangji, China.

出版信息

Front Plant Sci. 2017 Jan 10;7:2067. doi: 10.3389/fpls.2016.02067. eCollection 2016.

Abstract

Heat stress greatly affects plant growth/development and influences the output of crops. With the increased occurrence of extreme high temperature, the negative influence on cereal products from heat stress becomes severer and severer. It is urgent to reveal the molecular mechanism in response to heat stress in plants. In this research, we used RNA-seq technology to identify differentially expressed genes (DEGs) in leaves of seedlings, leaves and inflorescences at heading stage of , one model plant of grasses. Results showed many genes in responding to heat stress. Of them, the expression level of 656 DEGs were altered in three groups of samples treated with high temperature. Gene ontology (GO) analysis showed that the highly enriched DEGs were responsible for heat stress and protein folding. According to KEGG pathway analysis, the DEGs were related mainly to photosynthesis-antenna proteins, the endoplasmic reticulum, and the spliceosome. Additionally, the expression level of 454 transcription factors belonging to 49 gene families was altered, as well as 1,973 splicing events occurred after treatment with high temperature. This research lays a foundation for characterizing the molecular mechanism of heat stress response and identifying key genes for those responses in plants. These findings also clearly show that heat stress regulates the expression of genes not only at transcriptional level, but also at post-transcriptional level.

摘要

热胁迫极大地影响植物的生长/发育,并影响作物产量。随着极端高温天气的日益频繁,热胁迫对谷类作物产品的负面影响越来越严重。揭示植物对热胁迫响应的分子机制迫在眉睫。在本研究中,我们使用RNA测序技术鉴定了禾本科模式植物幼苗叶片、抽穗期叶片和花序中的差异表达基因(DEG)。结果显示有许多基因响应热胁迫。其中,656个DEG的表达水平在三组高温处理的样本中发生了改变。基因本体(GO)分析表明,高度富集的DEG与热胁迫和蛋白质折叠有关。根据KEGG通路分析,这些DEG主要与光合天线蛋白、内质网和剪接体有关。此外,属于49个基因家族的454个转录因子的表达水平发生了改变,高温处理后还发生了1973个剪接事件。本研究为阐明植物热胁迫响应的分子机制和鉴定这些响应的关键基因奠定了基础。这些发现还清楚地表明,热胁迫不仅在转录水平上,而且在转录后水平上调节基因的表达。

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