Institute of Quantitative Biology and Medicine, SRMP and RAD-X, Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education Institutions, Soochow University, Suzhou, 215123, China.
Computational Biological Center, IBM Thomas J. Watson Research Center, Yorktown Heights, NY, 10598, USA.
Small. 2017 Mar;13(12). doi: 10.1002/smll.201603685. Epub 2017 Jan 31.
The development of biocompatible nanomaterials for smart drug delivery and bioimaging has attracted great interest in recent years in biomedical fields. Here, the interaction between the recently reported nitrogenated graphene (C N) and a prototypical protein (villin headpiece HP35) utilizing atomistic molecular dynamics simulations is studied. The simulations reveal that HP35 can form a stable binding with the C N monolayer. Although the C N-HP35 attractive interactions are constantly preserved, the binding strength between C N and the protein is mild and does not cause significant distortion in the protein's structural integrity. This intrinsic biofriendly property of native C N is distinct from several widely studied nanomaterials, such as graphene, carbon nanotubes, and MoS , which can induce severe protein denaturation. Interestingly, once the protein is adsorbed onto C N surface, its transverse migration is highly restricted at the binding sites. This restriction is orchestrated by C N's periodic porous structure with negatively charged "holes," where the basic residues-such as lysine-can form stable interactions, thus functioning as "anchor points" in confining the protein displacement. It is suggested that the mild, immobilized protein attraction and biofriendly aspects of C N would make it a prospective candidate in bio- and medical-related applications.
近年来,用于智能药物输送和生物成像的生物相容性纳米材料的发展在生物医学领域引起了极大的兴趣。在这里,利用原子分子动力学模拟研究了最近报道的氮化石墨烯(C N)与典型蛋白质(绒毛蛋白头部 HP35)之间的相互作用。模拟表明,HP35 可以与 C N 单层形成稳定的结合。尽管 C N-HP35 的吸引力始终保持不变,但 C N 与蛋白质之间的结合强度较弱,不会导致蛋白质结构完整性的显著变形。与几种广泛研究的纳米材料(如石墨烯、碳纳米管和 MoS )不同,天然 C N 具有内在的生物友好特性,这些纳米材料会导致严重的蛋白质变性。有趣的是,一旦蛋白质被吸附到 C N 表面,其在结合部位的横向迁移就受到高度限制。这种限制是由 C N 的周期性多孔结构与带负电荷的“孔”协调的,其中碱性残基(如赖氨酸)可以形成稳定的相互作用,从而作为限制蛋白质位移的“锚点”。研究表明,C N 的温和、固定化的蛋白质吸引力和生物友好特性使其成为生物和医学相关应用的有前途的候选材料。