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二硫化钼纳米片对绒毛蛋白头部结构域的强烈变性作用:纳米毒性的潜在分子起源

Robust Denaturation of Villin Headpiece by MoS2 Nanosheet: Potential Molecular Origin of the Nanotoxicity.

作者信息

Gu Zonglin, Yang Zaixing, Kang Seung-Gu, Yang Jerry R, Luo Judong, Zhou Ruhong

机构信息

School for Radiological and Interdisciplinary Sciences (RAD-X) and Collaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education Institutions, Soochow University, Suzhou, 215123, China.

Computational Biological Center, IBM Thomas J. Watson Research Center, Yorktown Heights, NY 10598, USA.

出版信息

Sci Rep. 2016 Jun 17;6:28252. doi: 10.1038/srep28252.

Abstract

MoS2 nanosheet, a new two-dimensional transition metal dichalcogenides nanomaterial, has attracted significant attentions lately due to many potential promising biomedical applications. Meanwhile, there is also a growing concern on its biocompatibility, with little known on its interactions with various biomolecules such as proteins. In this study, we use all-atom molecular dynamics simulations to investigate the interaction of a MoS2 nanosheet with Villin Headpiece (HP35), a model protein widely used in protein folding studies. We find that MoS2 exhibits robust denaturing capability to HP35, with its secondary structures severely destroyed within hundreds of nanosecond simulations. Both aromatic and basic residues are critical for the protein anchoring onto MoS2 surface, which then triggers the successive protein unfolding process. The main driving force behind the adsorption process is the dispersion interaction between protein and MoS2 monolayer. Moreover, water molecules at the interface between some key hydrophobic residues (e.g. Trp-64) and MoS2 surface also help to accelerate the process driven by nanoscale drying, which provides a strong hydrophobic force. These findings might have shed new light on the potential nanotoxicity of MoS2 to proteins with atomic details, which should be helpful in guiding future biomedical applications of MoS2 with its nanotoxicity mitigated.

摘要

二硫化钼纳米片是一种新型的二维过渡金属二硫属化物纳米材料,由于其在生物医学领域具有许多潜在的应用前景,近年来受到了广泛关注。与此同时,人们对其生物相容性的关注也日益增加,而对其与蛋白质等各种生物分子的相互作用却知之甚少。在本研究中,我们使用全原子分子动力学模拟来研究二硫化钼纳米片与Villin Headpiece(HP35)的相互作用,HP35是一种在蛋白质折叠研究中广泛使用的模型蛋白。我们发现,二硫化钼对HP35具有强大的变性能力,在数百纳秒的模拟时间内,其二级结构被严重破坏。芳香族和碱性残基对于蛋白质锚定在二硫化钼表面都至关重要,进而引发蛋白质的连续解折叠过程。吸附过程背后的主要驱动力是蛋白质与二硫化钼单层之间的色散相互作用。此外,一些关键疏水残基(如Trp-64)与二硫化钼表面之间界面处的水分子也有助于加速由纳米尺度干燥驱动的过程,这提供了强大的疏水力。这些发现可能为二硫化钼对蛋白质潜在的纳米毒性提供了新的原子层面的见解,这将有助于指导未来减轻二硫化钼纳米毒性的生物医学应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b21a/4911589/8b7d9a96ec0d/srep28252-f1.jpg

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