Stark Julie, Renbarger Jamie, Slaven James, Yu Zhangsheng, Then Jenny, Skiles Jodi, Davis Stephanie
Department of Pediatrics, Indiana University School of Medicine, Indianapolis, Indiana.
Department of Hematology/Oncology, Indiana University School of Medicine, Indianapolis, Indiana.
Pediatr Pulmonol. 2017 Jul;52(7):916-921. doi: 10.1002/ppul.23678. Epub 2017 Feb 2.
Pulmonary complications after hematopoietic stem cell transplant (SCT) are associated with increased mortality. Genetic markers for those at risk for pulmonary impairment post-SCT have not been widely investigated.
Forty-nine patients were retrospectively selected from a single institution's biorepository with linked clinical data. All subjects performed pre-SCT PFTs. Genotyping was conducted using the Infinium Exome-24 BeadChip. Four single nucleotide polymorphisms (SNPs) were selected (rs1800871, rs1695, rs1800629, rs12477314) and evaluated for association with PFT parameters as change over time from baseline. Associations between SNPs and PFT parameters were assessed and adjusted for the following confounding variables: age, gender, and race.
Using the recessive genetic model, patients with one or two minor alleles for the glutathione S-transferase P1 (GSTP1) SNP rs1695 had a lower decline in FEV and FEF at 1-year post-SCT compared to patients who were homozygous for the ancestral allele (adjusted P-values <0.01 and 0.02, respectively). No other SNPs were significantly associated with other PFT parameters.
Our findings suggest that GSTP1 genotype may be associated with lung function during the first year post-SCT. Identifying and investigating genes that predispose patients to pulmonary complications after SCT may allow for more personalized patient management based on pre-emptive genetic testing. The glutathione S-transferase gene merits further investigation.
造血干细胞移植(SCT)后的肺部并发症与死亡率增加相关。SCT后肺部功能受损风险人群的遗传标志物尚未得到广泛研究。
从单一机构的生物样本库中回顾性选取49例患者,并关联临床数据。所有受试者均在SCT前进行了肺功能测试(PFT)。使用Infinium Exome-24 BeadChip进行基因分型。选择了四个单核苷酸多态性(SNP)(rs1800871、rs1695、rs1800629、rs12477314),并评估其与PFT参数随时间相对于基线变化的相关性。评估SNP与PFT参数之间的关联,并针对以下混杂变量进行调整:年龄、性别和种族。
采用隐性遗传模型,与祖先等位基因纯合的患者相比,谷胱甘肽S-转移酶P1(GSTP1)SNP rs1695有一个或两个次要等位基因的患者在SCT后1年时FEV和FEF的下降较低(调整后的P值分别<0.01和0.02)。没有其他SNP与其他PFT参数显著相关。
我们的研究结果表明,GSTP1基因型可能与SCT后第一年的肺功能有关。识别和研究使患者易发生SCT后肺部并发症的基因,可能有助于基于抢先基因检测进行更个性化的患者管理。谷胱甘肽S-转移酶基因值得进一步研究。