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从扩展 X 射线吸收精细结构中获得非斑块化的原子间距离策略。

Non-patchy strategy for inter-atomic distances from Extended X-ray Absorption Fine Structure.

机构信息

Department of Materials Science and Engineering, McMaster University, Hamilton, Ontario, L8S4L7, Canada.

School of Advanced Materials and Nanotechnology, Xidian University, Xi'an, Shaanxi, China.

出版信息

Sci Rep. 2017 Feb 9;7:42143. doi: 10.1038/srep42143.

DOI:10.1038/srep42143
PMID:28181529
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5299603/
Abstract

Extended X-ray Absorption Fine Structure (EXAFS) has been one of the few structural probes available for crystalline, non-crystalline and even highly disordered specimens. However, the data analysis involves a patchy and tinkering process, including back-and-forth fitting and filtering, leading to ambiguous answers sometimes. Here we try to resolve this long standing problem, to extract the inter-atomic distances from the experimental data by a single step minimization, in order to replace the tedious and tinkering process. The new strategy is built firmly by the mathematical logic, and made straightforward and undeniable. The finding demonstrates that it is possible to break off from the traditional patchy model fitting, and to remove the logical confusion of a priori prediction of the structure to be matched with experimental data, making it a much more powerful technique than the existing methods. The new method is expected to benefit EXAFS users covering all disciplines. Also, it is anticipated that the current work to be the motivation and inspiration to the further efforts.

摘要

扩展 X 射线吸收精细结构(EXAFS)一直是为数不多的适用于结晶、非晶态甚至高度无序样品的结构探针之一。然而,数据分析涉及到一个拼凑和修补的过程,包括来回拟合和过滤,有时会导致答案不明确。在这里,我们试图解决这个长期存在的问题,通过单次最小化从实验数据中提取原子间距离,以取代繁琐和修补的过程。这个新策略是由数学逻辑构建的,并且是直接的和不可否认的。研究结果表明,有可能打破传统的拼凑模型拟合,消除结构的先验预测与实验数据匹配的逻辑混乱,使其成为比现有方法更强大的技术。预计这种新方法将使涵盖所有学科的 EXAFS 用户受益。此外,预计当前的工作将为进一步的努力提供动力和灵感。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/ad4dab552951/srep42143-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/04c5217d17c4/srep42143-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/fe6b5c1e25cd/srep42143-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/927aba08574b/srep42143-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/90030f3de76c/srep42143-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/2bc31e7a958b/srep42143-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/ad4dab552951/srep42143-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/04c5217d17c4/srep42143-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/fe6b5c1e25cd/srep42143-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/927aba08574b/srep42143-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/90030f3de76c/srep42143-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/2bc31e7a958b/srep42143-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5562/5299603/ad4dab552951/srep42143-f6.jpg

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本文引用的文献

1
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J Am Chem Soc. 2015 Oct 14;137(40):12815-34. doi: 10.1021/jacs.5b00783. Epub 2015 Sep 29.
2
Optimization by simulated annealing.模拟退火优化。
Science. 1983 May 13;220(4598):671-80. doi: 10.1126/science.220.4598.671.
3
ATHENA, ARTEMIS, HEPHAESTUS: data analysis for X-ray absorption spectroscopy using IFEFFIT.
雅典娜、阿尔忒弥斯、赫菲斯托斯:使用IFEFFIT进行X射线吸收光谱的数据分析。
J Synchrotron Radiat. 2005 Jul;12(Pt 4):537-41. doi: 10.1107/S0909049505012719. Epub 2005 Jun 15.
4
Practical regularization methods for analysis of EXAFS spectra.用于EXAFS光谱分析的实用正则化方法。
J Synchrotron Radiat. 1999 May 1;6(Pt 3):271-3. doi: 10.1107/S0909049598018159.
5
The EXAFS family tree: a personal history of the development of extended X-ray absorption fine structure.扩展X射线吸收精细结构(EXAFS)的家族谱系:一段个人发展历程
J Synchrotron Radiat. 1999 May 1;6(Pt 3):123-34. doi: 10.1107/S0909049599001260.
6
IFEFFIT: interactive XAFS analysis and FEFF fitting.IFEFFIT:交互式XAFS分析与FEFF拟合
J Synchrotron Radiat. 2001 Mar 1;8(Pt 2):322-4. doi: 10.1107/s0909049500016964.
7
Number of relevant independent points in x-ray-absorption fine-structure spectra.X射线吸收精细结构光谱中相关独立点的数量。
Phys Rev B Condens Matter. 1993 Oct 1;48(13):9825-9827. doi: 10.1103/physrevb.48.9825.
8
Improved R-space resolution of EXAFS spectra using combined regularization methods and nonlinear least-squares fitting.使用组合正则化方法和非线性最小二乘法拟合提高扩展X射线吸收精细结构(EXAFS)光谱的R空间分辨率。
Phys Rev B Condens Matter. 1996 Aug 1;54(5):3169-3172. doi: 10.1103/physrevb.54.3169.
9
An Fe2IVO2 diamond core structure for the key intermediate Q of methane monooxygenase.用于甲烷单加氧酶关键中间体Q的Fe2IVO2金刚石核心结构。
Science. 1997 Jan 24;275(5299):515-8. doi: 10.1126/science.275.5299.515.