Landeta Cristina, Meehan Brian M, McPartland Laura, Ingendahl Linda, Hatahet Feras, Tran Ngoc Q, Boyd Dana, Beckwith Jon
From the Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts 02115.
From the Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts 02115
J Biol Chem. 2017 Apr 21;292(16):6529-6541. doi: 10.1074/jbc.M116.770891. Epub 2017 Feb 23.
Disulfide bonds contribute to protein stability, activity, and folding in a variety of proteins, including many involved in bacterial virulence such as toxins, adhesins, flagella, and pili, among others. Therefore, inhibitors of disulfide bond formation enzymes could have profound effects on pathogen virulence. In the disulfide bond formation pathway, the periplasmic protein DsbA introduces disulfide bonds into substrates, and then the cytoplasmic membrane protein DsbB reoxidizes DsbA's cysteines regenerating its activity. Thus, DsbB generates a protein disulfide bond by transferring electrons to the quinone pool. We previously identified an effective pyridazinone-related inhibitor of DsbB enzymes from several Gram-negative bacteria. To map the protein residues that are important for the interaction with this inhibitor, we randomly mutagenized by error-prone PCR the gene and selected mutants that confer resistance to this drug using two approaches. We characterized and some of these mutants that map to two areas in the structure of DsbB, one located between the two first transmembrane segments where the quinone ring binds and the other located in the second periplasmic loop of DsbB, which interacts with DsbA. In addition, we show that a mutant version of a protein involved in lipopolysaccharide assembly, , is synthetically lethal with the deletion of as well as with DsbB inhibitors. This finding suggests that drugs decreasing LptD assembly may be synthetically lethal with inhibitors of the Dsb pathway, potentiating the antibiotic effects.
二硫键有助于多种蛋白质的稳定性、活性和折叠,这些蛋白质包括许多参与细菌毒力的蛋白,如毒素、黏附素、鞭毛和菌毛等。因此,二硫键形成酶的抑制剂可能对病原体毒力产生深远影响。在二硫键形成途径中,周质蛋白DsbA将二硫键引入底物,然后细胞质膜蛋白DsbB将DsbA的半胱氨酸重新氧化,使其恢复活性。因此,DsbB通过将电子转移到醌池来生成蛋白质二硫键。我们之前从几种革兰氏阴性细菌中鉴定出一种有效的与哒嗪酮相关的DsbB酶抑制剂。为了确定与该抑制剂相互作用重要的蛋白质残基,我们通过易错PCR对该基因进行随机诱变,并使用两种方法筛选出对该药物具有抗性的突变体。我们对其中一些映射到DsbB结构中两个区域的突变体进行了表征,一个区域位于醌环结合的两个第一个跨膜段之间,另一个区域位于DsbB与DsbA相互作用的第二个周质环中。此外,我们表明参与脂多糖组装的一种蛋白质的突变体版本与LptD的缺失以及与DsbB抑制剂具有合成致死性。这一发现表明,降低LptD组装的药物可能与Dsb途径的抑制剂具有合成致死性,从而增强抗生素的作用。