Kim Sang Beom, Sparano Evan M, Singh Rakesh S, Debenedetti Pablo G
Department of Chemical and Biological Engineering, Princeton University , Princeton, New Jersey 08544, United States.
J Phys Chem Lett. 2017 Mar 16;8(6):1185-1190. doi: 10.1021/acs.jpclett.7b00184. Epub 2017 Feb 28.
Despite the importance of water sorption isotherms for a fundamental understanding of protein-water interactions, the microscopic origin of hysteresis between the adsorption and desorption branches is not well understood. Using our recently developed simulation technique, we compute the water sorption isotherms of two proteins, lysozyme and Trp-cage, a miniprotein. We explicitly compare protein-water interactions in adsorption and desorption processes, by analyzing local hydration in terms of hydrogen bonding, water density, and solvent-accessible surface area. We find that significant differences in hydration behavior between adsorption and desorption manifest themselves at the individual amino acid level, in particular around polar or charged residues. We confirm this observation by demonstrating that Trp-cage's hysteresis can be significantly reduced by mutating charged residues to alanine, a neutral and nonpolar amino acid.
尽管水吸附等温线对于从根本上理解蛋白质 - 水相互作用很重要,但吸附和解吸分支之间滞后现象的微观起源尚未得到很好的理解。利用我们最近开发的模拟技术,我们计算了两种蛋白质——溶菌酶和微型蛋白质色氨酸笼的水吸附等温线。通过从氢键、水密度和溶剂可及表面积方面分析局部水化作用,我们明确比较了吸附和解吸过程中的蛋白质 - 水相互作用。我们发现,吸附和解吸之间水化行为的显著差异在单个氨基酸水平上表现出来,特别是在极性或带电残基周围。我们通过证明将带电残基突变为丙氨酸(一种中性非极性氨基酸)可以显著降低色氨酸笼的滞后现象,证实了这一观察结果。