Braun Anthony R, Lacy Michael M, Ducas Vanessa C, Rhoades Elizabeth, Sachs Jonathan N
Department of Neuroscience, University of Minnesota, Minneapolis, MN, 55455, USA.
Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.
J Membr Biol. 2017 Apr;250(2):183-193. doi: 10.1007/s00232-017-9946-1. Epub 2017 Feb 26.
α-Synuclein is the primary protein found in Lewy bodies, the protein and lipid aggregates associated with Parkinson's disease and Lewy body dementia. The protein folds into a uniquely long amphipathic α-helix (AH) when bound to a membrane, and at high enough concentrations, it induces large-scale remodeling of membranes (tubulation and vesiculation). By engineering a less hydrophobic variant of α-Synuclein, we previously showed that the energy associated with binding of α-Synuclein's AH correlates with the extent of membrane remodeling (Braun et al. in J Am Chem Soc 136:9962-9972, 2014). In this study, we combine fluorescence correlation spectroscopy, electron microscopy, and vesicle clearance assays with coarse-grained molecular dynamics simulations to test the impact of decreasing the length of the amphipathic helix on membrane binding energy and tubulation. We show that truncation of α-Synuclein's AH length by approximately 15% reduces both its membrane binding affinity (by fivefold) and membrane remodeling capacity (by nearly 50% on per mole of bound protein basis). Results from simulations correlate well with the experiments and lend support to the idea that at high protein density there is a stabilization of individual, protein-induced membrane curvature fields. The extent to which these curvature fields are stabilized, a function of binding energy, dictates the extent of tubulation. Somewhat surprisingly, we find that this stabilization does not correlate directly with the geometric distribution of the proteins on the membrane surface.
α-突触核蛋白是路易小体中的主要蛋白质,路易小体是与帕金森病和路易体痴呆相关的蛋白质和脂质聚集体。该蛋白质与膜结合时会折叠成独特的长两亲性α-螺旋(AH),并且在足够高的浓度下,它会诱导膜的大规模重塑(形成微管和囊泡)。通过设计一种疏水性较低的α-突触核蛋白变体,我们先前表明,与α-突触核蛋白AH结合相关的能量与膜重塑程度相关(Braun等人,《美国化学会志》,2014年,第136卷,第9962 - 9972页)。在本研究中,我们将荧光相关光谱、电子显微镜和囊泡清除试验与粗粒度分子动力学模拟相结合,以测试缩短两亲性螺旋长度对膜结合能和微管形成的影响。我们表明,将α-突触核蛋白的AH长度截断约15%会降低其膜结合亲和力(降低五倍)和膜重塑能力(以每摩尔结合蛋白为基础降低近50%)。模拟结果与实验结果良好相关,并支持了这样一种观点,即在高蛋白密度下,单个蛋白质诱导的膜曲率场会得到稳定。这些曲率场的稳定程度(结合能的函数)决定了微管形成的程度。有点令人惊讶的是,我们发现这种稳定与蛋白质在膜表面的几何分布没有直接关联。