• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

tRNA 中的修饰碱基异戊烯基腺苷及其衍生物。

The modified base isopentenyladenosine and its derivatives in tRNA.

机构信息

a Institut für Biochemie und Molekularbiologie, Rheinische Friedrich-Wilhelms-Universität Bonn , Bonn , Germany.

出版信息

RNA Biol. 2017 Sep 2;14(9):1197-1208. doi: 10.1080/15476286.2017.1294309. Epub 2017 Feb 17.

DOI:10.1080/15476286.2017.1294309
PMID:28277934
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5699536/
Abstract

Base 37 in tRNA, 3'-adjacent to the anticodon, is occupied by a purine base that is thought to stabilize codon recognition by stacking interactions on the first Watson-Crick base pair. If the first codon position forms an A.U or U.A base pair, the purine is likely further modified in all domains of life. One of the first base modifications found in tRNA is N-isopentenyl adenosine (iA) present in a fraction of tRNAs in bacteria and eukaryotes, which can be further modified to 2-methyl-thio-N-isopentenyladenosine (msiA) in a subset of tRNAs. Homologous tRNA isopentenyl transferase enzymes have been identified in bacteria (MiaA), yeast (Mod5, Tit1), roundworm (GRO-1), and mammals (TRIT1). In eukaryotes, isopentenylation of cytoplasmic and mitochondrial tRNAs is mediated by products of the same gene. Accordingly, a patient with homozygous mutations in TRIT1 has mitochondrial disease. The role of iA in a subset of tRNAs in gene expression has been linked with translational fidelity, speed of translation, skewed gene expression, and non-sense suppression. This review will not cover the action of iA as a cytokinin in plants or the potential function of Mod5 as a prion in yeast.

摘要

反密码子 3' 端的 tRNA 碱基 37 被嘌呤碱基占据,该碱基通过与第一个 Watson-Crick 碱基对的堆积相互作用稳定密码子识别。如果第一个密码子位置形成 A.U 或 U.A 碱基对,则嘌呤碱基在所有生命领域都可能进一步修饰。在 tRNA 中发现的第一个碱基修饰之一是 N-异戊烯腺苷(iA),存在于细菌和真核生物的一部分 tRNA 中,它可以在 tRNA 的亚组中进一步修饰为 2-甲基硫代-N-异戊烯腺苷(msiA)。细菌(MiaA)、酵母(Mod5、Tit1)、蛔虫(GRO-1)和哺乳动物(TRIT1)中已鉴定出同源的 tRNA 异戊烯基转移酶。在真核生物中,细胞质和线粒体 tRNA 的异戊烯化由同一基因的产物介导。因此,TRIT1 基因纯合突变的患者会患有线粒体疾病。iA 在部分 tRNA 中在基因表达中的作用与翻译保真度、翻译速度、基因表达偏倚和无意义抑制有关。本综述将不涵盖 iA 在植物中作为细胞分裂素的作用,也不涵盖 Mod5 在酵母中作为朊病毒的潜在功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/4d7100dd6a7f/krnb-14-09-1294309-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/3bfed752649c/krnb-14-09-1294309-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/c8dd9ac5de8f/krnb-14-09-1294309-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/4d7100dd6a7f/krnb-14-09-1294309-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/3bfed752649c/krnb-14-09-1294309-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/c8dd9ac5de8f/krnb-14-09-1294309-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae8a/5699536/4d7100dd6a7f/krnb-14-09-1294309-g003.jpg

相似文献

1
The modified base isopentenyladenosine and its derivatives in tRNA.tRNA 中的修饰碱基异戊烯基腺苷及其衍生物。
RNA Biol. 2017 Sep 2;14(9):1197-1208. doi: 10.1080/15476286.2017.1294309. Epub 2017 Feb 17.
2
Transfer RNA recognition by the Escherichia coli delta2-isopentenyl-pyrophosphate:tRNA delta2-isopentenyl transferase: dependence on the anticodon arm structure.大肠杆菌δ2-异戊烯基焦磷酸:tRNA δ2-异戊烯基转移酶对转运RNA的识别:依赖于反密码子臂结构
RNA. 1997 Jul;3(7):721-33.
3
Genetic and physiological relationships among the miaA gene, 2-methylthio-N6-(delta 2-isopentenyl)-adenosine tRNA modification, and spontaneous mutagenesis in Escherichia coli K-12.大肠杆菌K-12中miaA基因、2-甲硫基-N6-(δ2-异戊烯基)-腺苷tRNA修饰与自发诱变之间的遗传和生理关系。
J Bacteriol. 1989 Jun;171(6):3233-46. doi: 10.1128/jb.171.6.3233-3246.1989.
4
Plasticity and diversity of tRNA anticodon determinants of substrate recognition by eukaryotic A37 isopentenyltransferases.真核生物 A37 异戊烯基转移酶识别底物的 tRNA 反密码子决定因素的可塑性和多样性。
RNA. 2011 Oct;17(10):1846-57. doi: 10.1261/rna.2628611. Epub 2011 Aug 26.
5
Targeting mitochondrial and cytosolic substrates of TRIT1 isopentenyltransferase: Specificity determinants and tRNA-i6A37 profiles.靶向 TRIT1 异戊烯基转移酶的线粒体和细胞质底物:特异性决定因素和 tRNA-i6A37 图谱。
PLoS Genet. 2020 Apr 23;16(4):e1008330. doi: 10.1371/journal.pgen.1008330. eCollection 2020 Apr.
6
Human cells have a limited set of tRNA anticodon loop substrates of the tRNA isopentenyltransferase TRIT1 tumor suppressor.人类细胞具有有限数量的 tRNA 反密码子环底物,其中 tRNA 异戊烯基转移酶 TRIT1 是肿瘤抑制因子。
Mol Cell Biol. 2013 Dec;33(24):4900-8. doi: 10.1128/MCB.01041-13. Epub 2013 Oct 14.
7
Lack of tRNA modification isopentenyl-A37 alters mRNA decoding and causes metabolic deficiencies in fission yeast.tRNA 修饰异戊烯基-A37 的缺乏改变了 mRNA 的解码,并导致裂殖酵母的代谢缺陷。
Mol Cell Biol. 2013 Aug;33(15):2918-29. doi: 10.1128/MCB.00278-13. Epub 2013 May 28.
8
An In Vitro Assay to Detect tRNA-Isopentenyl Transferase Activity.一种检测tRNA-异戊烯基转移酶活性的体外测定法。
J Vis Exp. 2018 Oct 8(140):58100. doi: 10.3791/58100.
9
Noninvasive diagnosis of TRIT1-related mitochondrial disorder by measuring i A37 and ms i A37 modifications in tRNAs from blood and urine samples.通过测量血液和尿液样本中 tRNA 的 iA37 和 msiA37 修饰物,实现 TRIT1 相关线粒体疾病的无创诊断。
Am J Med Genet A. 2019 Aug;179(8):1609-1614. doi: 10.1002/ajmg.a.61211. Epub 2019 May 29.
10
tRNA anticodons with the modified nucleoside 2-methylthio-N6-(4-hydroxyisopentenyl)adenosine distinguish between bases 3' of the codon.带有修饰核苷2-甲硫基-N6-(4-羟基异戊烯基)腺苷的tRNA反密码子能够区分密码子3'端的碱基。
J Mol Biol. 1991 Apr 5;218(3):509-16. doi: 10.1016/0022-2836(91)90697-5.

引用本文的文献

1
Structures of Naked Mole-Rat, Tuco-Tuco, and Guinea Pig Ribosomes-Is rRNA Fragmentation Linked to Translational Fidelity?裸鼹鼠、土豚和豚鼠核糖体的结构——核糖体RNA片段化与翻译保真度有关吗?
bioRxiv. 2025 Aug 2:2025.08.01.667930. doi: 10.1101/2025.08.01.667930.
2
tRNA modification profiling reveals epitranscriptome regulatory networks in Pseudomonas aeruginosa.转运RNA修饰谱揭示了铜绿假单胞菌中的表观转录组调控网络。
Nucleic Acids Res. 2025 Jul 19;53(14). doi: 10.1093/nar/gkaf696.
3
Purification of post-transcriptionally modified tRNAs for enhanced cell-free translation systems.

本文引用的文献

1
Genome recoding by tRNA modifications.通过tRNA修饰进行基因组重编码。
Open Biol. 2016 Dec;6(12). doi: 10.1098/rsob.160287.
2
A deafness-associated tRNAAsp mutation alters the m1G37 modification, aminoacylation and stability of tRNAAsp and mitochondrial function.一种与耳聋相关的天冬氨酸转运RNA(tRNAAsp)突变会改变tRNAAsp的1-甲基鸟苷37(m1G37)修饰、氨酰化作用及稳定性,并影响线粒体功能。
Nucleic Acids Res. 2016 Dec 15;44(22):10974-10985. doi: 10.1093/nar/gkw726. Epub 2016 Aug 17.
3
Why 21? The significance of selenoproteins for human health revealed by inborn errors of metabolism.
用于增强无细胞翻译系统的转录后修饰tRNA的纯化
bioRxiv. 2025 Jun 10:2025.06.10.658963. doi: 10.1101/2025.06.10.658963.
4
Post-Transcriptional Regulation of the MiaA Prenyl Transferase by CsrA and the Small RNA CsrB in .CsrA和小RNA CsrB对MiaA异戊烯基转移酶的转录后调控 于……
Int J Mol Sci. 2025 Jun 24;26(13):6068. doi: 10.3390/ijms26136068.
5
Are Bacterial Processes Dependent on Global Ribosome Pausing Affected by tRNA Modification Defects?细菌过程是否依赖于受tRNA修饰缺陷影响的全局核糖体暂停?
J Mol Biol. 2025 Aug 15;437(16):169107. doi: 10.1016/j.jmb.2025.169107. Epub 2025 Apr 10.
6
Metabolomic Reprogramming Induced by Benzo[a]pyene in Skin Keratinocytes and Protective Effects of Glutathione Amino Acid Precursors.苯并[a]芘诱导皮肤角质形成细胞的代谢重编程及谷胱甘肽氨基酸前体的保护作用
J Cosmet Dermatol. 2025 Apr;24(4):e70168. doi: 10.1111/jocd.70168.
7
Targeting the isoprenoid pathway in choleste biosynthesis: An approach to identify isoprenoid biosynthesis inhibitors.靶向胆固醇生物合成中的类异戊二烯途径:一种鉴定类异戊二烯生物合成抑制剂的方法。
Arch Pharm (Weinheim). 2025 Feb;358(2):e2400807. doi: 10.1002/ardp.202400807.
8
Fungal-Derived tRNAs Are Expressed and Aminoacylated in Orchid Mitochondria.真菌来源的tRNA在兰花线粒体中表达并进行氨酰化。
Mol Biol Evol. 2025 Feb 3;42(2). doi: 10.1093/molbev/msaf025.
9
tRNA hypomodification facilitates 5-fluorocytosine resistance via cross-pathway control system activation in Aspergillus fumigatus.在烟曲霉中,tRNA低修饰通过交叉途径控制系统激活促进对5-氟胞嘧啶的抗性。
Nucleic Acids Res. 2025 Jan 24;53(3). doi: 10.1093/nar/gkae1205.
10
tRNA modification profiling reveals epitranscriptome regulatory networks in .tRNA修饰谱揭示了……中的表观转录组调控网络。 (原文中“in”后面缺少具体内容)
bioRxiv. 2024 Jul 2:2024.07.01.601603. doi: 10.1101/2024.07.01.601603.
为什么是21?代谢先天性缺陷揭示了硒蛋白对人类健康的重要性。
FASEB J. 2016 Nov;30(11):3669-3681. doi: 10.1096/fj.201600424. Epub 2016 Jul 29.
4
An integrated, structure- and energy-based view of the genetic code.基于结构和能量的遗传密码综合观点。
Nucleic Acids Res. 2016 Sep 30;44(17):8020-40. doi: 10.1093/nar/gkw608. Epub 2016 Jul 22.
5
Radical S-Adenosylmethionine Enzymes in Human Health and Disease.人类健康与疾病中的自由基 S-腺苷甲硫氨酸酶。
Annu Rev Biochem. 2016 Jun 2;85:485-514. doi: 10.1146/annurev-biochem-060713-035504. Epub 2016 May 4.
6
Nucleoside modifications in the regulation of gene expression: focus on tRNA.基因表达调控中的核苷修饰:聚焦于转运RNA
Cell Mol Life Sci. 2016 Aug;73(16):3075-95. doi: 10.1007/s00018-016-2217-y. Epub 2016 Apr 19.
7
The i6A37 tRNA modification is essential for proper decoding of UUX-Leucine codons during rpoS and iraP translation.i6A37 tRNA修饰对于在rpoS和iraP翻译过程中正确解码UUX-亮氨酸密码子至关重要。
RNA. 2016 May;22(5):729-42. doi: 10.1261/rna.053165.115. Epub 2016 Mar 15.
8
Lack of tRNA-i6A modification causes mitochondrial-like metabolic deficiency in S. pombe by limiting activity of cytosolic tRNATyr, not mito-tRNA.缺乏tRNA-i6A修饰会通过限制胞质tRNATyr而非线粒体tRNA的活性,导致粟酒裂殖酵母出现类似线粒体的代谢缺陷。
RNA. 2016 Apr;22(4):583-96. doi: 10.1261/rna.054064.115. Epub 2016 Feb 8.
9
Mutation in human selenocysteine transfer RNA selectively disrupts selenoprotein synthesis.人类硒代半胱氨酸转运RNA中的突变选择性地破坏硒蛋白的合成。
J Clin Invest. 2016 Mar 1;126(3):992-6. doi: 10.1172/JCI84747. Epub 2016 Feb 8.
10
Global translational impacts of the loss of the tRNA modification tA in yeast.酵母中tRNA修饰tA缺失的全球翻译影响。
Microb Cell. 2016 Jan 1;3(1):29-45. doi: 10.15698/mic2016.01.473.