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80 个与性发育障碍相关基因的靶向下一代测序在诊断中的应用。

Diagnostic Application of Targeted Next-Generation Sequencing of 80 Genes Associated with Disorders of Sexual Development.

机构信息

Department of Pediatric Endocrinology/Genetics, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai Institute for Pediatric Research, Shanghai, 200092, China.

Department of Endocrinology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, China.

出版信息

Sci Rep. 2017 Mar 15;7:44536. doi: 10.1038/srep44536.

Abstract

Disorders of sexual development (DSD) are estimated to occur in 1 of 4500 births. Since the genetic etiology of DSD is highly heterogeneous, obtaining a definitive molecular diagnosis by single gene test is challenging. Utilizing a high-throughput sequencing upfront is proposed as an efficient approach to aid in the diagnosis. This study aimed to examine the diagnostic yield of next-generation sequencing in DSD. 32 DSD patients that previously received clinical examinations and single gene tests were selected, with or without a diagnosis. Prior single gene tests were masked, and then samples went through targeted next-generation sequencing of 80 genes from which the diagnostic yield was assessed. A likely diagnosis, with pathogenic or likely pathogenic variants identified, was obtained from nine of the 32 patients (i.e., 28.1%, versus 10% by single gene tests). In another five patients (15.6%), variants of uncertain significance were found. Among 18 variants identified (i.e., 17 single nucleotide variants and one small deletion), eight had not been previously reported. This study supports the notion that next-generation sequencing can be an efficient tool in the clinical diagnosis and variant discovery in DSD.

摘要

性发育障碍(DSD)估计每 4500 例出生中就会发生 1 例。由于 DSD 的遗传病因高度异质,通过单一基因测试获得明确的分子诊断具有挑战性。因此,建议使用高通量测序作为一种有效的方法来辅助诊断。本研究旨在检查下一代测序在 DSD 中的诊断效果。选择了 32 名先前接受过临床检查和单一基因测试的 DSD 患者,无论是否有诊断。先前的单一基因测试是屏蔽的,然后对 80 个基因进行靶向下一代测序,评估其诊断效果。从 32 名患者中的 9 名(即 28.1%,而单一基因测试为 10%)中获得了可能的诊断,其中确定了致病性或可能致病性变异。另外 5 名患者(15.6%)发现了意义不明的变异。在鉴定的 18 个变异中(即 8 个单核苷酸变异和 1 个小缺失),有 8 个以前没有报道过。本研究支持这样一种观点,即下一代测序可以作为 DSD 临床诊断和变异发现的有效工具。

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