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本文引用的文献

1
Acute necrotizing encephalopathy causing human bocavirus.人博卡病毒所致急性坏死性脑病
Neuroradiol J. 2017 Apr;30(2):164-167. doi: 10.1177/1971400916687586. Epub 2017 Jan 6.
2
Human Parvoviruses.人类细小病毒
Clin Microbiol Rev. 2017 Jan;30(1):43-113. doi: 10.1128/CMR.00040-16.
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Frequent Detection and Genetic Diversity of Human Bocavirus in Urban Sewage Samples.城市污水样本中人类博卡病毒的频繁检测及基因多样性
Food Environ Virol. 2016 Dec;8(4):289-295. doi: 10.1007/s12560-016-9251-7. Epub 2016 Jun 16.
4
Mapping Antigenic Epitopes on the Human Bocavirus Capsid.绘制人博卡病毒衣壳上的抗原表位图谱。
J Virol. 2016 Apr 14;90(9):4670-4680. doi: 10.1128/JVI.02998-15. Print 2016 May.
5
Nonstructural Protein NP1 of Human Bocavirus 1 Plays a Critical Role in the Expression of Viral Capsid Proteins.人博卡病毒1型的非结构蛋白NP1在病毒衣壳蛋白的表达中起关键作用。
J Virol. 2016 Apr 14;90(9):4658-4669. doi: 10.1128/JVI.02964-15. Print 2016 May.
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The influence of frame alignment with dose compensation on the quality of single particle reconstructions.帧对齐与剂量补偿对单颗粒重建质量的影响。
J Struct Biol. 2015 Nov;192(2):196-203. doi: 10.1016/j.jsb.2015.09.006. Epub 2015 Sep 25.
7
CTFFIND4: Fast and accurate defocus estimation from electron micrographs.CTFFIND4:从电子显微照片中快速准确地估计散焦量。
J Struct Biol. 2015 Nov;192(2):216-21. doi: 10.1016/j.jsb.2015.08.008. Epub 2015 Aug 13.
8
Human bocavirus infection as a cause of severe acute respiratory tract infection in children.人博卡病毒感染是儿童严重急性呼吸道感染的病因。
Clin Microbiol Infect. 2015 Oct;21(10):964.e1-8. doi: 10.1016/j.cmi.2015.06.014. Epub 2015 Jun 19.
9
Structure of an enteric pathogen, bovine parvovirus.肠道病原体牛细小病毒的结构
J Virol. 2015 Mar;89(5):2603-14. doi: 10.1128/JVI.03157-14. Epub 2014 Dec 17.
10
Adeno-associated virus serotype 1 (AAV1)- and AAV5-antibody complex structures reveal evolutionary commonalities in parvovirus antigenic reactivity.1型腺相关病毒(AAV1)和AAV5抗体复合物结构揭示了细小病毒抗原反应性的进化共性。
J Virol. 2015 Feb;89(3):1794-808. doi: 10.1128/JVI.02710-14. Epub 2014 Nov 19.

人博卡病毒的结构洞察

Structural Insights into Human Bocaparvoviruses.

作者信息

Mietzsch Mario, Kailasan Shweta, Garrison Jamie, Ilyas Maria, Chipman Paul, Kantola Kalle, Janssen Mandy E, Spear John, Sousa Duncan, McKenna Robert, Brown Kevin, Söderlund-Venermo Maria, Baker Timothy, Agbandje-McKenna Mavis

机构信息

Department of Biochemistry and Molecular Biology, Center for Structural Biology, McKnight Brain Institute, College of Medicine, University of Florida, Gainesville, Florida, USA.

Department of Virology, University of Helsinki, Helsinki, Finland.

出版信息

J Virol. 2017 May 12;91(11). doi: 10.1128/JVI.00261-17. Print 2017 Jun 1.

DOI:10.1128/JVI.00261-17
PMID:28331084
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5432872/
Abstract

Bocaparvoviruses are emerging pathogens of the family. Human bocavirus 1 (HBoV1) causes severe respiratory infections and HBoV2 to HBoV4 cause gastrointestinal infections in young children. Recent reports of life-threatening cases, lack of direct treatment or vaccination, and a limited understanding of their disease mechanisms highlight the need to study these pathogens on a molecular and structural level for the development of therapeutics. Toward this end, the capsid structures of HBoV1, HBoV3, and HBoV4 were determined to a resolution of 2.8 to 3.0 Å by cryo-electron microscopy and three-dimensional image reconstruction. The bocaparvovirus capsids, which display different tissue tropisms, have features in common with other parvoviruses, such as depressions at the icosahedral 2-fold symmetry axis and surrounding the 5-fold symmetry axis, protrusions surrounding the 3-fold symmetry axis, and a channel at the 5-fold symmetry axis. However, unlike other parvoviruses, densities extending the 5-fold channel into the capsid interior are conserved among the bocaparvoviruses and are suggestive of a genus-specific function. Additionally, their major viral protein 3 contains loops with variable regions at their apexes conferring capsid surface topologies different from those of other parvoviruses. Structural comparisons at the strain (HBoV) and genus (bovine parvovirus and HBoV) levels identified differences in surface loops that are functionally important in host/tissue tropism, pathogenicity, and antigenicity in other parvoviruses and likely play similar roles in these viruses. This study thus provides a structural framework to characterize determinants of host/tissue tropism, pathogenicity, and antigenicity for the development of antiviral strategies to control human bocavirus infections. Human bocaviruses are one of only a few members of the family pathogenic to humans, especially young children and immunocompromised adults. There are currently no treatments or vaccines for these viruses or the related enteric bocaviruses. This study obtained the first high-resolution structures of three human bocaparvoviruses determined by cryo-reconstruction. HBoV1 infects the respiratory tract, and HBoV3 and HBoV4 infect the gastrointestinal tract, tissues that are likely targeted by the capsid. Comparison of these viruses provides information on conserved bocaparvovirus-specific features and variable regions resulting in unique surface topologies that can serve as guides to characterize HBoV determinants of tissue tropism and antigenicity in future experiments. Based on the comparison to other existing parvovirus capsid structures, this study suggests capsid regions that likely control successful infection, including determinants of receptor attachment, host cell trafficking, and antigenic reactivity. Overall, these observations could impact efforts to design antiviral strategies and vaccines for HBoVs.

摘要

博卡病毒是该病毒科中不断出现的病原体。人博卡病毒1型(HBoV1)可引起严重的呼吸道感染,而HBoV2至HBoV4则可导致幼儿胃肠道感染。最近有关危及生命病例的报道、缺乏直接治疗方法或疫苗以及对其疾病机制的了解有限,凸显了在分子和结构层面研究这些病原体以开发治疗方法的必要性。为此,通过冷冻电子显微镜和三维图像重建确定了HBoV1、HBoV3和HBoV4的衣壳结构,分辨率达到2.8至3.0 Å。博卡病毒的衣壳表现出不同的组织嗜性,具有与其他细小病毒共同的特征,如在二十面体2重对称轴处和围绕5重对称轴处有凹陷、围绕3重对称轴处有突起以及在5重对称轴处有一个通道。然而,与其他细小病毒不同的是,博卡病毒中延伸5重通道至衣壳内部的密度是保守的,提示存在属特异性功能。此外,它们的主要病毒蛋白3在顶端含有带有可变区的环,赋予衣壳表面拓扑结构不同于其他细小病毒的特征。在毒株(HBoV)和属(牛细小病毒和HBoV)水平上的结构比较确定了表面环的差异,这些差异在其他细小病毒的宿主/组织嗜性、致病性和抗原性方面具有功能重要性,并且在这些病毒中可能发挥类似作用。因此,本研究提供了一个结构框架,用于表征宿主/组织嗜性、致病性和抗原性的决定因素,以制定控制人博卡病毒感染的抗病毒策略。人博卡病毒是该病毒科中仅有的少数对人类致病的成员之一,尤其是对幼儿和免疫功能低下的成年人。目前尚无针对这些病毒或相关肠道博卡病毒的治疗方法或疫苗。本研究通过冷冻重建获得了三种人博卡病毒的首个高分辨率结构。HBoV1感染呼吸道,HBoV3和HBoV4感染胃肠道,这些组织可能是衣壳的靶向部位。对这些病毒的比较提供了关于博卡病毒特异性保守特征和可变区的信息,这些可变区导致独特的表面拓扑结构,可作为未来实验中表征HBoV组织嗜性和抗原性决定因素的指南。基于与其他现有细小病毒衣壳结构的比较,本研究提示了可能控制成功感染的衣壳区域,包括受体附着、宿主细胞运输和抗原反应性的决定因素。总体而言,这些观察结果可能会影响针对HBoV设计抗病毒策略和疫苗的努力。