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采用环介导等温扩增结合侧向流动试纸条检测法检测人乳头瘤病毒16型和18型

Detection assay for HPV16 and HPV18 by loop‑mediated isothermal amplification with lateral flow dipstick tests.

作者信息

Kumvongpin Ratchanida, Jearanaikoon Patcharee, Wilailuckana Chotchana, Sae-Ung Nattaya, Prasongdee Prinya, Daduang Sakda, Wongsena Metee, Boonsiri Patcharee, Kiatpathomchai Wansika, Swangvaree Sukumarn Sanersak, Sandee Alisa, Daduang Jureerut

机构信息

Centre for Research and Development of Medical Diagnostic Laboratories, Faculty of Associated Medical Sciences, Khon Kaen University, Khon Kaen 40002, Thailand.

Division of Pharmacology and Toxicology, Faculty of Pharmaceutical Sciences, Khon Kaen University, Khon Kaen 40002, Thailand.

出版信息

Mol Med Rep. 2017 May;15(5):3203-3209. doi: 10.3892/mmr.2017.6370. Epub 2017 Mar 23.

Abstract

Cervical cancer is the third highest cause of death in developing countries and most commonly results from high‑risk human papillomavirus (HR‑HPV) infection. Among HR‑HPV genotypes, HPV16 and HPV18 are the most prevalent in cervical cancers. Therefore, the present study aimed to develop a detection assay for HPV16 and HPV18 infection using loop‑mediated isothermal amplification (LAMP) with lateral flow dipstick (LFD) tests. This assay is a simplified, user‑friendly method for the visual detection of HPV genotypes. DNA was extracted from clinical tissue samples, and HPV genotyping was performed using nested polymerase chain reaction (PCR). The clinical samples were demonstrated to include 44 HPV16‑positive, 18 HPV18‑positive and 80 HPV‑negative samples. All DNA samples were also used as templates for a LAMP reaction (30 min at 65˚C), and subsequently, a fluorescein isothiocyanate‑labelled probe was hybridized with the reaction product. Finally, the LFD test was performed. The sensitivity of the LAMP‑LFD test was higher than LAMP‑turbidity, exhibiting up to 100‑fold higher sensitivity for HPV16 and 10‑fold higher sensitivity for HPV18. All HPV16 and HPV18‑positive samples generated positive results in both assays; however, 22 samples detected as HPV‑negative by LAMP‑turbidity exhibited positive results by LAMP‑LFD test (22 of 80 samples). Therefore, these samples were further examined using quantitative (q)PCR. The results demonstrated that 20 out of the 22 samples designated positive by LAMP‑LFD, but negative by LAMP turbidity, gave a positive result with qPCR, while the remaining 2 samples were negative by qPCR. The present results suggested that LAMP‑LFD provided higher sensitivity than LAMP‑turbidity and nested PCR. Thus, the LAMP‑LFD test developed in the present study might be useful for the detection of HPV16 and HPV18 in local hospitals.

摘要

宫颈癌是发展中国家第三大致死原因,最常见的病因是高危型人乳头瘤病毒(HR-HPV)感染。在HR-HPV基因型中,HPV16和HPV18在宫颈癌中最为常见。因此,本研究旨在开发一种使用环介导等温扩增(LAMP)结合侧向流动试纸条(LFD)检测的方法,用于检测HPV16和HPV18感染。该检测方法是一种用于可视化检测HPV基因型的简化、用户友好型方法。从临床组织样本中提取DNA,并使用巢式聚合酶链反应(PCR)进行HPV基因分型。临床样本经证实包括44例HPV16阳性、18例HPV18阳性和80例HPV阴性样本。所有DNA样本也用作LAMP反应的模板(65˚C孵育30分钟),随后,将异硫氰酸荧光素标记的探针与反应产物杂交。最后,进行LFD检测。LAMP-LFD检测的灵敏度高于LAMP-浊度法,对HPV16的灵敏度高100倍,对HPV18的灵敏度高10倍。所有HPV16和HPV18阳性样本在两种检测方法中均产生阳性结果;然而,22例经LAMP-浊度法检测为HPV阴性的样本,经LAMP-LFD检测呈阳性(80例样本中的22例)。因此,使用定量(q)PCR对这些样本进行进一步检测。结果表明,在LAMP-LFD检测中被判定为阳性但LAMP浊度法检测为阴性的22例样本中,有20例qPCR检测结果为阳性,其余2例qPCR检测结果为阴性。目前的结果表明,LAMP-LFD比LAMP-浊度法和巢式PCR具有更高的灵敏度。因此,本研究开发的LAMP-LFD检测方法可能有助于在当地医院检测HPV16和HPV18。

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