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深度测序分析 HBV pre-S 区准种及其与肝细胞癌的关系。

Deep sequencing analysis of quasispecies in the HBV pre-S region and its association with hepatocellular carcinoma.

机构信息

Department of Medicine, University of Hong Kong, Hong Kong Special Administrative Region, China.

Department of Medicine, Fourth People's Hospital of Shenzhen, Shenzhen, China.

出版信息

J Gastroenterol. 2017 Sep;52(9):1064-1074. doi: 10.1007/s00535-017-1334-1. Epub 2017 Mar 28.

DOI:10.1007/s00535-017-1334-1
PMID:28353014
Abstract

BACKGROUND

The association between the evolution of hepatitis B virus (HBV) quasispecies and the development of hepatocellular carcinoma (HCC) is unknown.

METHODS

We used deep sequencing to examine the dynamics of HBV quasispecies and their relationship to HCC development. Thirty-two chronic hepatitis B (CHB) patients with HCC (HCC group) and 32 matched CHB patients without HCC (controls) were recruited. Fourteen patients from each group had serial sera available up to 9 years before the time of the present study. Deep sequencing of the HBV pre-S regions was performed. HBV quasispecies complexity, diversity, and intrapatient prevalence of pre-S deletions/mutations were analyzed.

RESULTS

Compared with control patients, HCC patients had a significant greater quasispecies complexity (p = 0.04 at the nucleotide level), greater diversity (p = 0.004 and 0.009 at the nucleotide level and the amino acid level respectively), and a trend of greater complexity at the amino acid level (p = 0.065). HCC patients had a higher intrapatient prevalence of pre-S deletions and point mutations (at codons 4, 27, and 167) compared with the control patients (all p < 0.05). Longitudinal observation in the sera of 14 HCC patients showed that quasispecies complexity (p = 0.027 and 0.024 at the nucleotide level and the amino acid level respectively) and diversity (p = 0.035 and 0.031 at the nucleotide level and the amino acid level respectively) increased as the disease progressed to HCC.

CONCLUSIONS

Increased HBV quasispecies complexity and diversity in the pre-S region, probably reflecting enhanced virus-host interplay, was associated with disease progression from CHB to HCC.

摘要

背景

乙型肝炎病毒(HBV)准种的演变与肝细胞癌(HCC)的发生发展之间的关系尚不清楚。

方法

我们使用深度测序来检测 HBV 准种的动态及其与 HCC 发展的关系。招募了 32 例乙型肝炎慢性感染(CHB)合并 HCC(HCC 组)和 32 例匹配的 CHB 无 HCC(对照组)患者。每个组中有 14 例患者的血清可用于本研究前 9 年的连续检测。对 HBV 前 S 区进行深度测序。分析 HBV 准种的复杂性、多样性以及前 S 缺失/突变的个体内流行率。

结果

与对照组相比,HCC 组患者的准种复杂性显著增加(核苷酸水平,p=0.04),多样性也显著增加(核苷酸水平和氨基酸水平,p=0.004 和 0.009),并且氨基酸水平的复杂性也有增加的趋势(p=0.065)。与对照组相比,HCC 组患者的前 S 缺失和点突变(在密码子 4、27 和 167 处)的个体内流行率更高(均 p<0.05)。对 14 例 HCC 患者的血清进行纵向观察显示,准种复杂性(核苷酸水平和氨基酸水平,p=0.027 和 0.024)和多样性(核苷酸水平和氨基酸水平,p=0.035 和 0.031)随着疾病进展为 HCC 而增加。

结论

前 S 区 HBV 准种复杂性和多样性的增加,可能反映了病毒-宿主相互作用的增强,与从 CHB 进展为 HCC 有关。

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Coexistence of hepatitis B virus quasispecies enhances viral replication and the ability to induce host antibody and cellular immune responses.
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