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四膜虫中四种精氨酸激酶的特性:底物抑制机制研究

Characterization of four arginine kinases in the ciliate Paramecium tetraurelia: Investigation on the substrate inhibition mechanism.

作者信息

Yano Daichi, Suzuki Takaya, Hirokawa Saki, Fuke Kyoko, Suzuki Tomohiko

机构信息

Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780-8520 Japan.

Laboratory of Biochemistry, Faculty of Science, Kochi University, Kochi 780-8520 Japan.

出版信息

Int J Biol Macromol. 2017 Aug;101:653-659. doi: 10.1016/j.ijbiomac.2017.03.133. Epub 2017 Mar 27.

Abstract

The ciliate Paramecium tetraurelia contains four arginine kinase genes (AK1-4). We detected cDNA for only three of the AKs (AK1-3) via PCR. Recombinant AK1-4 were expressed in Escherichia coli and their kinetics parameters determined. AK3 showed typical substrate inhibition toward arginine, and enzymatic activity markedly decreased when arginine concentration increased. This is the first example of substrate inhibition in wild-type phosphagen kinases. To explore the substrate inhibition mechanism, site-directed mutations were generated, targeting the amino acid sequence D-D-S-Q-V at positions 77-81 in P. tetraurelia AK3. Among the mutants, substrate inhibition was lost remarkably in the S79A mutant. In spite of high amino acid sequence identity (91%) between P. tetraurelia AK3 and AK4, the enzymatic activity of AK4 was less by 3% than that of AK3. We noticed that the conservative G298 was unusually replaced by R in P. tetraurelia AK4, and we constructed two mutants, R298G/AK4 and G298R/AK3. Enzymatic activity of the former mutant was comparable with that of the wild-type AK3, whereas that of the latter mutant was dramatically reduced. Thus, we concluded that the significantly low activity of P. tetraurelia AK4 is due to the residue R298.

摘要

纤毛虫四膜虫含有四个精氨酸激酶基因(AK1 - 4)。我们通过聚合酶链反应(PCR)仅检测到其中三个AK基因(AK1 - 3)的互补DNA(cDNA)。重组AK1 - 4在大肠杆菌中表达,并测定了它们的动力学参数。AK3对精氨酸表现出典型的底物抑制作用,当精氨酸浓度增加时,酶活性显著降低。这是野生型磷酸原激酶中底物抑制的首个实例。为探究底物抑制机制,针对四膜虫AK3中77 - 81位的氨基酸序列D - D - S - Q - V进行了定点突变。在这些突变体中,S79A突变体的底物抑制作用明显丧失。尽管四膜虫AK3与AK4之间具有较高的氨基酸序列同一性(91%),但AK4的酶活性比AK3低3%。我们注意到四膜虫AK4中保守的G298异常地被R取代,我们构建了两个突变体,R298G/AK4和G298R/AK3。前一个突变体的酶活性与野生型AK3相当,而后一个突变体的酶活性则显著降低。因此,我们得出结论,四膜虫AK4活性显著较低是由于R298这个残基。

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