Watson N F, Buchwald D, Delrow J J, Altemeier W A, Vitiello M V, Pack A I, Bamshad M, Noonan C, Gharib S A
Department of Neurology, University of Washington, Seattle, WA.
UW Medicine Sleep Center, University of Washington, Seattle, WA.
Sleep. 2017 Jan 1;40(1). doi: 10.1093/sleep/zsw019.
Habitual short sleep duration is associated with adverse metabolic, cardiovascular, and inflammatory effects. Co-twin study methodologies account for familial (eg, genetics and shared environmental) confounding, allowing assessment of subtle environmental effects, such as the effect of habitual short sleep duration on gene expression. Therefore, we investigated gene expression in monozygotic twins discordant for actigraphically phenotyped habitual sleep duration.
Eleven healthy monozygotic twin pairs (82% female; mean age 42.7 years; SD = 18.1), selected based on subjective sleep duration discordance, were objectively phenotyped for habitual sleep duration with 2 weeks of wrist actigraphy. Peripheral blood leukocyte (PBL) RNA from fasting blood samples was obtained on the final day of actigraphic measurement and hybridized to Illumina humanHT-12 microarrays. Differential gene expression was determined between paired samples and mapped to functional categories using Gene Ontology. Finally, a more comprehensive gene set enrichment analysis was performed based on the entire PBL transcriptome.
The mean 24-hour sleep duration of the total sample was 439.2 minutes (SD = 46.8 minutes; range 325.4-521.6 minutes). Mean within-pair sleep duration difference per 24 hours was 64.4 minutes (SD = 21.2; range 45.9-114.6 minutes). The twin cohort displayed distinctive pathway enrichment based on sleep duration differences. Habitual short sleep was associated with up-regulation of genes involved in transcription, ribosome, translation, and oxidative phosphorylation. Unexpectedly, genes down-regulated in short sleep twins were highly enriched in immuno-inflammatory pathways such as interleukin signaling and leukocyte activation, as well as developmental programs, coagulation cascade, and cell adhesion.
Objectively assessed habitual sleep duration in monozygotic twin pairs appears to be associated with distinct patterns of differential gene expression and pathway enrichment. By accounting for familial confounding and measuring real life sleep duration, our study shows the transcriptomic effects of habitual short sleep on dysregulated immune response and provides a potential link between sleep deprivation and adverse metabolic, cardiovascular, and inflammatory outcomes.
习惯性短睡眠时间与不良的代谢、心血管和炎症效应相关。双胞胎研究方法可排除家族性(如遗传和共同环境因素)的混杂影响,从而能够评估细微的环境效应,例如习惯性短睡眠时间对基因表达的影响。因此,我们研究了在经活动记录仪表型分型的习惯性睡眠时间不一致的同卵双胞胎中的基因表达情况。
基于主观睡眠时间不一致选择了11对健康的同卵双胞胎(82%为女性;平均年龄42.7岁;标准差 = 18.1),通过为期2周的手腕活动记录仪对习惯性睡眠时间进行客观表型分型。在活动记录仪测量的最后一天,从空腹血样中获取外周血白细胞(PBL)RNA,并与Illumina humanHT-12微阵列进行杂交。确定配对样本之间的差异基因表达,并使用基因本体论将其映射到功能类别。最后,基于整个PBL转录组进行更全面的基因集富集分析。
整个样本的平均24小时睡眠时间为439.2分钟(标准差 = 46.8分钟;范围325.4 - 521.6分钟)。每24小时配对睡眠时间的平均差异为64.4分钟(标准差 = 21.2;范围45.9 - 114.6分钟)。双胞胎队列根据睡眠时间差异显示出独特的通路富集。习惯性短睡眠与参与转录、核糖体、翻译和氧化磷酸化的基因上调相关。出乎意料的是,短睡眠双胞胎中下调的基因在免疫炎症通路如白细胞介素信号传导和白细胞激活以及发育程序、凝血级联和细胞黏附中高度富集。
在同卵双胞胎对中客观评估的习惯性睡眠时间似乎与不同的差异基因表达模式和通路富集相关。通过排除家族性混杂因素并测量实际生活中的睡眠时间,我们的研究显示了习惯性短睡眠对免疫反应失调的转录组学效应,并提供了睡眠剥夺与不良代谢、心血管和炎症结局之间的潜在联系。