Laboratory of Computational Biophysics, German Research School for Simulation Sciences GmbH, Joint venture of RWTH Aachen University and Forschungszentrum Jülich, 52425 Jülich, Germany.
Computational Biomedicine section, Institute of Advanced Simulation (IAS-5), Institute of Neuroscience and Medicine (INM-9), Forschungszentrum Jülich, 52425 Jülich, Germany.
Sci Rep. 2017 Apr 3;8:45761. doi: 10.1038/srep45761.
G-protein coupled receptors (GPCRs) are the largest and most pharmaceutically relevant family of membrane proteins. Here, fully unbiased, enhanced sampling simulations of a constitutively active mutant (CAM) of a class A GPCR, the μ-opioid receptor (μOR), demonstrates repeated transitions between the inactive (IS) and active-like (AS-L) states. The interconversion features typical activation/inactivation patterns involving established conformational rearrangements of conserved residues. By contrast, wild-type μOR remains in IS during the same course of simulation, consistent with the low basal activity of the protein. The simulations point to an important role of residue W293 at the "toggle switch" in the mutation-induced constitutive activation. Such role has been already observed for other CAMs of class A GPCRs. We also find a significantly populated intermediate state, rather similar to IS. Based on the remarkable accord between simulations and experiments, we suggest here that this state, which has escaped so far experimental characterization, might constitute an early step in the activation process of the apo μOR CAM.
G 蛋白偶联受体 (GPCRs) 是最大和最具药物相关性的膜蛋白家族。在这里,对一种 A 类 GPCR(μ 阿片受体 (μOR))的组成型激活突变体 (CAM) 进行了完全无偏、增强采样模拟,证明了其在非活性 (IS) 和类似活性 (AS-L) 状态之间的反复转换。这种互变特征具有典型的激活/失活模式,涉及保守残基的已建立构象重排。相比之下,在相同的模拟过程中,野生型 μOR 仍然处于 IS 状态,这与该蛋白的低基础活性一致。模拟表明,在突变诱导的组成型激活中,“Toggle Switch”处的残基 W293 起着重要作用。这种作用已经在其他 A 类 GPCR 的 CAM 中观察到。我们还发现了一个中间状态,其丰度较高,与 IS 相当相似。基于模拟和实验之间的显著一致性,我们在此建议,这种状态迄今为止尚未被实验表征,可能构成apo μOR CAM 激活过程的早期步骤。