Smitienko O A, Nekrasova O V, Kudriavtsev A V, Yakovleva M A, Shelaev I V, Gostev F E, Dolgikh D A, Kolchugina I B, Nadtochenko V A, Kirpichnikov M P, Feldman T B, Ostrovsky M A
Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, 119334, Russia.
Biochemistry (Mosc). 2017 Apr;82(4):490-500. doi: 10.1134/S0006297917040113.
Photochemical reaction dynamics of the primary events in recombinant bacteriorhodopsin (bR) was studied by femtosecond laser absorption spectroscopy with 25-fs time resolution. bR was produced in an Escherichia coli expression system. Since bR was prepared in a DMPC-CHAPS micelle system in the monomeric form, its comparison with trimeric and monomeric forms of the native bacteriorhodopsin (bR and bR, respectively) was carried out. We found that bR intermediate I (excited state of bR) was formed in the range of 100 fs, as in the case of bR and bR. Further processes, namely the decay of the excited state I and the formation of intermediates J and K of bR, occurred more slowly compared to bR, but similarly to bR. The lifetime of intermediate I, judging from the signal of ΔA(470-480 nm), was 0.68 ps (78%) and 4.4 ps (22%) for bR, 0.52 ps (73%) and 1.7 ps (27%) for bR, and 0.45 ps (90%) and 1.75 ps (10%) for bR. The formation time of intermediate K, judging from the signal of ΔA(625-635 nm), was 13.5 ps for bR, 9.8 ps for bR, and 4.3 ps for bR. In addition, there was a decrease in the photoreaction efficiency of bR and bR as seen by a decrease in absorbance in the differential spectrum of the intermediate K by ~14%. Since photochemical properties of bR are similar to those of the monomeric form of the native protein, bR and its mutants can be considered as a basis for further studies of the mechanism of bacteriorhodopsin functioning.
利用具有25飞秒时间分辨率的飞秒激光吸收光谱研究了重组细菌视紫红质(bR)初级事件的光化学反应动力学。bR是在大肠杆菌表达系统中产生的。由于bR是以单体形式在二肉豆蔻酰磷脂酰胆碱-3-[(3-胆酰胺丙基)二甲基铵]-1-丙磺酸(DMPC-CHAPS)胶束系统中制备的,因此将其与天然细菌视紫红质的三聚体和单体形式(分别为bR和bR)进行了比较。我们发现,与bR和bR的情况一样,bR中间体I(bR的激发态)在100飞秒范围内形成。进一步的过程,即激发态I的衰减以及bR中间体J和K的形成,与bR相比发生得更慢,但与bR相似。根据ΔA(470 - 480nm)信号判断,中间体I的寿命对于bR分别为0.68皮秒(78%)和4.4皮秒(22%),对于bR分别为0.52皮秒(73%)和1.7皮秒(27%),对于bR分别为0.45皮秒(90%)和1.75皮秒(10%)。根据ΔA(625 - 635nm)信号判断,中间体K的形成时间对于bR为13.5皮秒,对于bR为9.8皮秒,对于bR为4.3皮秒。此外,如中间体K的差分光谱中吸光度下降约14%所示,bR和bR的光反应效率有所降低。由于bR的光化学性质与天然蛋白质单体形式的相似,bR及其突变体可被视为进一步研究细菌视紫红质功能机制的基础。