Suppr超能文献

人 3-羟基犬尿氨酸 3,4-双加氧酶与结合在活性部位的天然和非天然金属的晶体结构。

Crystal structures of human 3-hydroxyanthranilate 3,4-dioxygenase with native and non-native metals bound in the active site.

机构信息

Department of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Department of Pharmaceutical Sciences, University of Maryland School of Pharmacy, Baltimore, MD 21201, USA.

出版信息

Acta Crystallogr D Struct Biol. 2017 Apr 1;73(Pt 4):340-348. doi: 10.1107/S2059798317002029. Epub 2017 Mar 31.

Abstract

3-Hydroxyanthranilate 3,4-dioxygenase (3HAO) is an enzyme in the microglial branch of the kynurenine pathway of tryptophan degradation. 3HAO is a non-heme iron-containing, ring-cleaving extradiol dioxygenase that catalyzes the addition of both atoms of O to the kynurenine pathway metabolite 3-hydroxyanthranilic acid (3-HANA) to form quinolinic acid (QUIN). QUIN is a highly potent excitotoxin that has been implicated in a number of neurodegenerative conditions, making 3HAO a target for pharmacological downregulation. Here, the first crystal structure of human 3HAO with the native iron bound in its active site is presented, together with an additional structure with zinc (a known inhibitor of human 3HAO) bound in the active site. The metal-binding environment is examined both structurally and via inductively coupled plasma mass spectrometry (ICP-MS), X-ray fluorescence spectroscopy (XRF) and electron paramagnetic resonance spectroscopy (EPR). The studies identified Met35 as the source of potential new interactions with substrates and inhibitors, which may prove useful in future therapeutic efforts.

摘要

3-羟犬尿氨酸 3,4-双加氧酶(3HAO)是犬尿酸途径中色氨酸降解的小胶质分支中的一种酶。3HAO 是一种非血红素铁结合的、环裂解的外二醇加氧酶,它催化将氧的两个原子添加到犬尿酸途径代谢物 3-羟基犬尿氨酸(3-HANA)中,形成喹啉酸(QUIN)。QUIN 是一种非常有效的兴奋性毒素,与许多神经退行性疾病有关,这使得 3HAO 成为药理学下调的靶点。本文首次报道了与人 3HAO 结合在其活性部位的天然铁的晶体结构,以及另一个锌(已知的人 3HAO 抑制剂)结合在活性部位的结构。通过电感耦合等离子体质谱(ICP-MS)、X 射线荧光光谱(XRF)和电子顺磁共振光谱(EPR)对金属结合环境进行了结构和非结构研究。这些研究确定了 Met35 作为与底物和抑制剂可能存在新相互作用的来源,这可能对未来的治疗努力有用。

相似文献

1
Crystal structures of human 3-hydroxyanthranilate 3,4-dioxygenase with native and non-native metals bound in the active site.
Acta Crystallogr D Struct Biol. 2017 Apr 1;73(Pt 4):340-348. doi: 10.1107/S2059798317002029. Epub 2017 Mar 31.
4
Human 3-hydroxyanthranilate 3,4-dioxygenase () dynamics and reaction, a multilevel computational study.
Mol Biosyst. 2015 Mar;11(3):898-907. doi: 10.1039/c4mb00668b. Epub 2015 Jan 15.
5
Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Proc Natl Acad Sci U S A. 2020 Aug 18;117(33):19720-19730. doi: 10.1073/pnas.2005327117. Epub 2020 Jul 30.
6
Crystal structure of bovine 3-hydroxyanthranilate 3,4-dioxygenase.
Biopolymers. 2009 Dec;91(12):1189-95. doi: 10.1002/bip.21167.
7
An Iron Reservoir to the Catalytic Metal: THE RUBREDOXIN IRON IN AN EXTRADIOL DIOXYGENASE.
J Biol Chem. 2015 Jun 19;290(25):15621-15634. doi: 10.1074/jbc.M115.650259. Epub 2015 Apr 27.
8
Synthesis of quinolinic acid by 3-hydroxyanthranilic acid oxygenase in rat brain tissue in vitro.
J Neurochem. 1986 Jul;47(1):23-30. doi: 10.1111/j.1471-4159.1986.tb02826.x.
10
Effects of oxygen on 3-hydroxyanthranilate oxidase of the kynurenine pathway.
Free Radic Biol Med. 1998 Dec;25(9):1033-43. doi: 10.1016/s0891-5849(98)00136-1.

引用本文的文献

1
mebipred: identifying metal-binding potential in protein sequence.
Bioinformatics. 2022 Jul 11;38(14):3532-3540. doi: 10.1093/bioinformatics/btac358.
2
New cases that expand the genotypic and phenotypic spectrum of Congenital NAD Deficiency Disorder.
Hum Mutat. 2021 Jul;42(7):862-876. doi: 10.1002/humu.24211. Epub 2021 May 16.
3
Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens.
Proc Natl Acad Sci U S A. 2020 Aug 18;117(33):19720-19730. doi: 10.1073/pnas.2005327117. Epub 2020 Jul 30.

本文引用的文献

1
Disruption of brain zinc homeostasis promotes the pathophysiological progress of Alzheimer's disease.
Histol Histopathol. 2016 Jun;31(6):623-7. doi: 10.14670/HH-11-737. Epub 2016 Feb 17.
2
An Iron Reservoir to the Catalytic Metal: THE RUBREDOXIN IRON IN AN EXTRADIOL DIOXYGENASE.
J Biol Chem. 2015 Jun 19;290(25):15621-15634. doi: 10.1074/jbc.M115.650259. Epub 2015 Apr 27.
4
Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions.
Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):136-53. doi: 10.1107/S1399004714021683.
6
How good are my data and what is the resolution?
Acta Crystallogr D Biol Crystallogr. 2013 Jul;69(Pt 7):1204-14. doi: 10.1107/S0907444913000061. Epub 2013 Jun 13.
7
Kynurenines in the mammalian brain: when physiology meets pathology.
Nat Rev Neurosci. 2012 Jul;13(7):465-77. doi: 10.1038/nrn3257.
8
Handling ligands with Coot.
Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):425-30. doi: 10.1107/S0907444912000200. Epub 2012 Mar 16.
9
Quantitative imaging of mitochondrial and cytosolic free zinc levels in an in vitro model of ischemia/reperfusion.
J Bioenerg Biomembr. 2012 Apr;44(2):253-63. doi: 10.1007/s10863-012-9427-2. Epub 2012 Mar 20.
10
Microglial zinc uptake via zinc transporters induces ATP release and the activation of microglia.
Glia. 2011 Dec;59(12):1933-45. doi: 10.1002/glia.21235. Epub 2011 Aug 24.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验