Liao Miao, Zhao Yu-Qian, Liu Xi-Yao, Zeng Ye-Zhan, Zou Bei-Ji, Wang Xiao-Fang, Shih Frank Y
School of Information Science and Engineering, Central South University, Changsha 410083, China; School of Computer Science and Engineering, Hunan University of Science and Technology, Xiangtan 411201, China.
School of Information Science and Engineering, Central South University, Changsha 410083, China.
Comput Methods Programs Biomed. 2017 May;143:1-12. doi: 10.1016/j.cmpb.2017.02.015. Epub 2017 Feb 27.
Identifying liver regions from abdominal computed tomography (CT) volumes is an important task for computer-aided liver disease diagnosis and surgical planning. This paper presents a fully automatic method for liver segmentation from CT volumes based on graph cuts and border marching.
An initial slice is segmented by density peak clustering. Based on pixel- and patch-wise features, an intensity model and a PCA-based regional appearance model are developed to enhance the contrast between liver and background. Then, these models as well as the location constraint estimated iteratively are integrated into graph cuts in order to segment the liver in each slice automatically. Finally, a vessel compensation method based on the border marching is used to increase the segmentation accuracy.
Experiments are conducted on a clinical data set we created and also on the MICCAI2007 Grand Challenge liver data. The results show that the proposed intensity, appearance models, and the location constraint are significantly effective for liver recognition, and the undersegmented vessels can be compensated by the border marching based method. The segmentation performances in terms of VOE, RVD, ASD, RMSD, and MSD as well as the average running time achieved by our method on the SLIVER07 public database are 5.8 ± 3.2%, -0.1 ± 4.1%, 1.0 ± 0.5mm, 2.0 ± 1.2mm, 21.2 ± 9.3mm, and 4.7 minutes, respectively, which are superior to those of existing methods.
The proposed method does not require time-consuming training process and statistical model construction, and is capable of dealing with complicated shapes and intensity variations successfully.
从腹部计算机断层扫描(CT)容积中识别肝脏区域是计算机辅助肝病诊断和手术规划的一项重要任务。本文提出了一种基于图割和边界推进的从CT容积中全自动分割肝脏的方法。
通过密度峰值聚类对初始切片进行分割。基于像素和图像块特征,开发了强度模型和基于主成分分析的区域外观模型,以增强肝脏与背景之间的对比度。然后,将这些模型以及迭代估计的位置约束集成到图割中,以便自动分割每个切片中的肝脏。最后,使用基于边界推进的血管补偿方法提高分割精度。
在我们创建的临床数据集以及MICCAI2007肝脏分割大赛数据上进行了实验。结果表明,所提出的强度、外观模型和位置约束对肝脏识别具有显著效果,并且基于边界推进的方法可以补偿分割不足的血管。我们的方法在SLIVER07公共数据库上实现的VOE、RVD、ASD、RMSD和MSD等分割性能以及平均运行时间分别为5.8±3.2%、-0.1±4.1%、1.0±0.5mm、2.0±1.2mm、21.2±9.3mm和4.7分钟,优于现有方法。
所提出的方法不需要耗时的训练过程和统计模型构建,并且能够成功处理复杂形状和强度变化。