Matthijs Michiel, Fabris Michele, Obata Toshihiro, Foubert Imogen, Franco-Zorrilla José Manuel, Solano Roberto, Fernie Alisdair R, Vyverman Wim, Goossens Alain
Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Center for Plant Systems Biology, VIB, Ghent, Belgium.
EMBO J. 2017 Jun 1;36(11):1559-1576. doi: 10.15252/embj.201696392. Epub 2017 Apr 18.
Diatoms are amongst the most important marine microalgae in terms of biomass, but little is known concerning the molecular mechanisms that regulate their versatile metabolism. Here, the pennate diatom was studied at the metabolite and transcriptome level during nitrogen starvation and following imposition of three other stresses that impede growth. The coordinated upregulation of the tricarboxylic acid (TCA) cycle during the nitrogen stress response was the most striking observation. Through co-expression analysis and DNA binding assays, the transcription factor bZIP14 was identified as a regulator of the TCA cycle, also beyond the nitrogen starvation response, namely in diurnal regulation. Accordingly, metabolic and transcriptional shifts were observed upon overexpression of in transformed cells. Our data indicate that the TCA cycle is a tightly regulated and important hub for carbon reallocation in the diatom cell during nutrient starvation and that bZIP14 is a conserved regulator of this cycle.
就生物量而言,硅藻是最重要的海洋微藻之一,但对于调节其多样代谢的分子机制却知之甚少。在此,对羽纹硅藻在氮饥饿期间以及施加其他三种阻碍生长的胁迫后进行了代谢物和转录组水平的研究。氮胁迫响应期间三羧酸(TCA)循环的协同上调是最显著的观察结果。通过共表达分析和DNA结合试验,转录因子bZIP14被鉴定为TCA循环的调节因子,不仅在氮饥饿响应中起作用,即在昼夜调节中也发挥作用。因此,在转化的细胞中过表达时观察到了代谢和转录变化。我们的数据表明,TCA循环是营养饥饿期间硅藻细胞中碳重新分配的一个受到严格调控的重要枢纽,并且bZIP14是该循环的一个保守调节因子。