蓝细菌和真核藻类中的光敏色素多样化。
Phytochrome diversification in cyanobacteria and eukaryotic algae.
作者信息
Rockwell Nathan C, Lagarias J Clark
机构信息
Department of Molecular and Cellular Biology, 31 Briggs Hall, One Shields Avenue, University of California, Davis, CA 95616, United States of America.
Department of Molecular and Cellular Biology, 31 Briggs Hall, One Shields Avenue, University of California, Davis, CA 95616, United States of America.
出版信息
Curr Opin Plant Biol. 2017 Jun;37:87-93. doi: 10.1016/j.pbi.2017.04.003. Epub 2017 Apr 23.
Abstract
Phytochromes control almost every aspect of plant biology, including germination, growth, development, and flowering, in response to red and far-red light. These photoreceptors thus hold considerable promise for engineering crop plant responses to light. Recently, structural research has shed new light on how phytochromes work. Genomic and transcriptomic studies have improved our understanding of phytochrome loss, retention, and diversification during evolution. We are also beginning to understand phytochrome function in cyanobacteria and eukaryotic algae.
摘要
光敏色素控制着植物生物学的几乎每个方面，包括种子萌发、生长、发育和开花，以响应红光和远红光。因此，这些光感受器在设计作物对光的反应方面具有巨大的潜力。最近，结构研究为光敏色素的工作方式提供了新的线索。基因组和转录组研究增进了我们对光敏色素在进化过程中的丢失、保留和多样化的理解。我们也开始了解光敏色素在蓝细菌和真核藻类中的功能。
相似文献
1
Phytochrome diversification in cyanobacteria and eukaryotic algae.蓝细菌和真核藻类中的光敏色素多样化。
Curr Opin Plant Biol. 2017 Jun;37:87-93. doi: 10.1016/j.pbi.2017.04.003. Epub 2017 Apr 23.
2
Phytochrome evolution in 3D: deletion, duplication, and diversification.植物光形态建成中的光敏色素进化：缺失、复制和多样化。
New Phytol. 2020 Mar;225(6):2283-2300. doi: 10.1111/nph.16240. Epub 2019 Nov 2.
3
The impact of the phytochromes on photosynthetic processes.植物光敏色素对光合作用过程的影响。
Biochim Biophys Acta Bioenerg. 2018 May;1859(5):400-408. doi: 10.1016/j.bbabio.2018.03.003. Epub 2018 Mar 12.
4
Evolutionary aspects of plant photoreceptors.植物光感受器的进化方面。
J Plant Res. 2016 Mar;129(2):115-22. doi: 10.1007/s10265-016-0785-4. Epub 2016 Feb 3.
5
Evolution of cyanobacterial and plant phytochromes.蓝藻和植物光敏色素的进化。
FEBS Lett. 2004 Aug 27;573(1-3):1-5. doi: 10.1016/j.febslet.2004.07.050.
6
Decoding of light signals by plant phytochromes and their interacting proteins.植物光敏色素及其相互作用蛋白对光信号的解码
Annu Rev Plant Biol. 2008;59:281-311. doi: 10.1146/annurev.arplant.59.032607.092859.
7
Phytochromes and Cyanobacteriochromes: Photoreceptor Molecules Incorporating a Linear Tetrapyrrole Chromophore.植物色素和蓝细菌视紫红质：包含线性四吡咯发色团的光受体分子。
Adv Exp Med Biol. 2021;1293:167-187. doi: 10.1007/978-981-15-8763-4_10.
8
Cyanobacterial origin of plant phytochromes.植物光敏色素的蓝细菌起源
Protoplasma. 2017 Jan;254(1):603-607. doi: 10.1007/s00709-016-0951-5. Epub 2016 Feb 11.
9
From photon to signal in phytochromes: similarities and differences between prokaryotic and plant phytochromes.从光量子到光敏色素中的信号：原核生物与植物光敏色素的异同
J Plant Res. 2016 Mar;129(2):123-35. doi: 10.1007/s10265-016-0789-0. Epub 2016 Jan 27.
10
Light-regulated nucleo-cytoplasmic partitioning of phytochromes.光调控的光敏色素核质分配
J Exp Bot. 2007;58(12):3113-24. doi: 10.1093/jxb/erm145. Epub 2007 Sep 27.
引用本文的文献
1
Circular dichroism spectroscopy reveals multiple phytochrome photoproducts in equilibrium.圆二色光谱揭示了处于平衡状态的多种光敏色素光产物。
Photochem Photobiol Sci. 2025 Jul 18. doi: 10.1007/s43630-025-00763-2.
2
Dual-Cys bacteriophytochromes: intermediates in cyanobacterial phytochrome evolution?双半胱氨酸细菌光敏色素：蓝藻光敏色素进化的中间产物？
FEBS J. 2025 Mar;292(5):1197-1216. doi: 10.1111/febs.17395. Epub 2025 Jan 13.
3
Light quality, oxygenic photosynthesis and more.光质、氧光合作用等等。
Photosynthetica. 2022 Jan 6;60(1):25-28. doi: 10.32615/ps.2021.055. eCollection 2022.
4
Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor.细菌光致异构酶组氨酸激酶的信号转导涉及一个构象级联反应，该反应重新组织二聚体光受体。
Nat Commun. 2024 Aug 10;15(1):6853. doi: 10.1038/s41467-024-50412-y.
5
Crystal structure of the photosensory module from a PAS-less cyanobacterial phytochrome as Pr shows a mix of dark-adapted and photoactivated features.无 PAS 结构的蓝细菌光敏色素光感模块的晶体结构作为 Pr 显示出暗适应和光激活特征的混合。
J Biol Chem. 2024 Jul;300(7):107369. doi: 10.1016/j.jbc.2024.107369. Epub 2024 May 14.
6
Diurnal Rhythms in the Red Seaweed Gracilariopsis chorda are Characterized by Unique Regulatory Networks of Carbon Metabolism.红海巨藻昼夜节律的特征是碳代谢的独特调控网络。
Mol Biol Evol. 2024 Feb 1;41(2). doi: 10.1093/molbev/msae012.
7
Responding to light signals: a comprehensive update on photomorphogenesis in cyanobacteria.对光信号的响应：蓝藻光形态建成的全面更新
Physiol Mol Biol Plants. 2023 Dec;29(12):1915-1930. doi: 10.1007/s12298-023-01386-6. Epub 2023 Nov 18.
8
Using azobenzene photocontrol to set proteins in motion.利用偶氮苯光控使蛋白质运动。
Nat Rev Chem. 2022 Feb;6(2):112-124. doi: 10.1038/s41570-021-00338-6. Epub 2021 Dec 7.
9
Multiple Light-Dark Signals Regulate Expression of the DEAD-Box RNA Helicase CrhR in PCC 6803.多亮暗信号调控 PCC 6803 中 DEAD 盒 RNA 解旋酶 CrhR 的表达。
Cells. 2022 Oct 27;11(21):3397. doi: 10.3390/cells11213397.
10
Response and regulatory mechanisms of heat resistance in pathogenic fungi.致病真菌耐热性的响应和调控机制。
Appl Microbiol Biotechnol. 2022 Sep;106(17):5415-5431. doi: 10.1007/s00253-022-12119-2. Epub 2022 Aug 9.
本文引用的文献
1
The phycocyanobilin chromophore of streptophyte algal phytochromes is synthesized by HY2.链形植物藻类光敏色素的藻蓝胆素发色团是由HY2合成的。
New Phytol. 2017 May;214(3):1145-1157. doi: 10.1111/nph.14422. Epub 2017 Jan 20.
2
Gene transfers from diverse bacteria compensate for reductive genome evolution in the chromatophore of Paulinella chromatophora.来自不同细菌的基因转移补偿了绿叶海蜗牛色素体中还原性基因组的进化。
Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):12214-12219. doi: 10.1073/pnas.1608016113. Epub 2016 Oct 10.
3
Far-red light photoacclimation (FaRLiP) in Synechococcus sp. PCC 7335: I. Regulation of FaRLiP gene expression.聚球藻属PCC 7335中的远红光光适应（FaRLiP）：I. FaRLiP基因表达的调控
Photosynth Res. 2017 Feb;131(2):173-186. doi: 10.1007/s11120-016-0309-z. Epub 2016 Sep 16.
4
Structural photoactivation of a full-length bacterial phytochrome.结构光激活全细菌光敏色素。
Sci Adv. 2016 Aug 12;2(8):e1600920. doi: 10.1126/sciadv.1600920. eCollection 2016 Aug.
5
Light-dependent chlorophyll f synthase is a highly divergent paralog of PsbA of photosystem II.光依赖叶绿素 f 合酶是光合系统 II 的 PsbA 的高度分化的旁系同源物。
Science. 2016 Aug 26;353(6302). doi: 10.1126/science.aaf9178. Epub 2016 Jul 7.
6
Functional Relationship between a Dinoflagellate Host and Its Diatom Endosymbiont.甲藻宿主与其硅藻内共生体之间的功能关系。
Mol Biol Evol. 2016 Sep;33(9):2376-90. doi: 10.1093/molbev/msw109. Epub 2016 Jun 13.
7
Holophytochrome-Interacting Proteins in Physcomitrella: Putative Actors in Phytochrome Cytoplasmic Signaling.小立碗藓中与全光色素相互作用的蛋白质：光敏色素细胞质信号传导中的假定作用因子
Front Plant Sci. 2016 May 12;7:613. doi: 10.3389/fpls.2016.00613. eCollection 2016.
8
Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean.硅藻光敏色素揭示了海洋中基于远红光感知的存在。
Plant Cell. 2016 Mar;28(3):616-28. doi: 10.1105/tpc.15.00928. Epub 2016 Mar 3.
9
De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions.纤细裸藻响应厌氧条件的从头组装和比较转录组分析
BMC Genomics. 2016 Mar 3;17:182. doi: 10.1186/s12864-016-2540-6.
10
Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion.光激活状态下嗜放射栖热菌光敏色素的晶体结构揭示了光转化过程中的一系列结构重排。
Structure. 2016 Mar 1;24(3):448-57. doi: 10.1016/j.str.2016.01.001. Epub 2016 Feb 4.
Zotero 插件