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损伤染色质中组蛋白的动态变化。

Choreography of parental histones in damaged chromatin.

机构信息

a Epigenetics & Cell Fate Centre, UMR7216 CNRS , Paris Diderot University, Sorbonne Paris Cité , Paris , France.

出版信息

Nucleus. 2017 May 4;8(3):255-260. doi: 10.1080/19491034.2017.1292192. Epub 2017 Feb 23.

DOI:10.1080/19491034.2017.1292192
PMID:28448742
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5499907/
Abstract

In the cell nucleus, DNA repair machineries operate on a chromatin substrate, whose integrity is key for preserving cell functions and identity. Yet, it is still unclear how the epigenetic information conveyed by chromatin is maintained during the DNA repair process. We recently characterized the dynamics of parental histones coupled to UV-C damage repair in human cells, providing insights into how the pre-damage chromatin state may be restored. Here, we summarize our main findings and discuss them in the context of epigenome maintenance following DNA damage. We further address the mechanistic aspects of repair-coupled histone dynamics and develop working hypotheses regarding their functional relevance in the cellular response to genotoxic stress.

摘要

在细胞核中,DNA 修复机制在染色质底物上发挥作用,其完整性对于维持细胞功能和身份至关重要。然而,目前尚不清楚染色质所传递的表观遗传信息如何在 DNA 修复过程中得以维持。我们最近对人类细胞中与 UV-C 损伤修复相关的亲本组蛋白动力学进行了表征,深入了解了预先存在的染色质状态如何得以恢复。在这里,我们总结了主要发现,并在 DNA 损伤后表观基因组维持的背景下对其进行了讨论。我们进一步探讨了修复相关组蛋白动力学的机制方面,并提出了关于其在细胞应对遗传毒性应激中的功能相关性的工作假设。

相似文献

1
Choreography of parental histones in damaged chromatin.损伤染色质中组蛋白的动态变化。
Nucleus. 2017 May 4;8(3):255-260. doi: 10.1080/19491034.2017.1292192. Epub 2017 Feb 23.
2
Live Imaging of Parental Histone Variant Dynamics in UVC-Damaged Chromatin.UVC损伤染色质中亲本组蛋白变体动力学的实时成像
Methods Mol Biol. 2018;1832:243-253. doi: 10.1007/978-1-4939-8663-7_13.
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Real-Time Tracking of Parental Histones Reveals Their Contribution to Chromatin Integrity Following DNA Damage.亲代组蛋白的实时追踪揭示了它们在DNA损伤后对染色质完整性的贡献。
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Reshaping chromatin after DNA damage: the choreography of histone proteins.DNA损伤后重塑染色质:组蛋白的编排
J Mol Biol. 2015 Feb 13;427(3):626-36. doi: 10.1016/j.jmb.2014.05.025. Epub 2014 Jun 2.
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How to restore chromatin structure and function in response to DNA damage--let the chaperones play: delivered on 9 July 2013 at the 38th FEBS Congress in St Petersburg, Russia.如何恢复 DNA 损伤应答中的染色质结构和功能——让伴侣蛋白发挥作用:2013 年 7 月 9 日在俄罗斯圣彼得堡举行的第 38 届欧洲生物化学学会联合会大会上发表。
FEBS J. 2014 May;281(10):2315-23. doi: 10.1111/febs.12793. Epub 2014 Apr 9.
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The cullin 4B-based UV-damaged DNA-binding protein ligase binds to UV-damaged chromatin and ubiquitinates histone H2A.基于Cullin 4B的紫外线损伤DNA结合蛋白连接酶与紫外线损伤的染色质结合,并使组蛋白H2A泛素化。
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Ital J Biochem. 2007 Jun;56(2):141-8.
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Imaging local deposition of newly synthesized histones in UVC-damaged chromatin.成像新合成组蛋白在紫外线C损伤染色质中的局部沉积。
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Chromatin dynamics during nucleotide excision repair: histones on the move.核苷酸切除修复过程中的染色质动力学:移动中的组蛋白
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Germline stem cell gene PIWIL2 mediates DNA repair through relaxation of chromatin.胚系干细胞基因 PIWIL2 通过放松染色质来介导 DNA 修复。
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Looking At the Past and Heading to the Future: Meeting Summary of the 6 European Workshop on Plant Chromatin 2019 in Cologne, Germany.回顾过去,展望未来:2019年德国科隆第六届欧洲植物染色质研讨会会议纪要
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The histone chaperoning pathway: from ribosome to nucleosome.组蛋白伴侣通路:从核糖体到核小体。
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本文引用的文献

1
Re-establishment of nucleosome occupancy during double-strand break repair in budding yeast.芽殖酵母双链断裂修复过程中核小体占据率的重新建立。
DNA Repair (Amst). 2016 Nov;47:21-29. doi: 10.1016/j.dnarep.2016.09.005. Epub 2016 Sep 28.
2
Real-Time Tracking of Parental Histones Reveals Their Contribution to Chromatin Integrity Following DNA Damage.亲代组蛋白的实时追踪揭示了它们在DNA损伤后对染色质完整性的贡献。
Mol Cell. 2016 Oct 6;64(1):65-78. doi: 10.1016/j.molcel.2016.08.019. Epub 2016 Sep 15.
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Nucleosome disassembly during human non-homologous end joining followed by concerted HIRA- and CAF-1-dependent reassembly.人类非同源末端连接过程中的核小体解聚,随后是由HIRA和CAF-1协同依赖的重新组装。
Elife. 2016 Jun 8;5:e15129. doi: 10.7554/eLife.15129.
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Molecular mechanisms of DNA damage recognition for mammalian nucleotide excision repair.哺乳动物核苷酸切除修复中DNA损伤识别的分子机制。
DNA Repair (Amst). 2016 Aug;44:110-117. doi: 10.1016/j.dnarep.2016.05.015. Epub 2016 May 20.
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Epigenome Maintenance in Response to DNA Damage.应对DNA损伤时的表观基因组维持
Mol Cell. 2016 Jun 2;62(5):712-27. doi: 10.1016/j.molcel.2016.04.006.
6
Preferential Phosphorylation on Old Histones during Early Mitosis in Human Cells.人类细胞有丝分裂早期旧组蛋白上的优先磷酸化作用
J Biol Chem. 2016 Jul 15;291(29):15342-57. doi: 10.1074/jbc.M116.726067. Epub 2016 May 19.
7
Formation of Chromosomal Domains by Loop Extrusion.通过环状挤压形成染色体结构域
Cell Rep. 2016 May 31;15(9):2038-49. doi: 10.1016/j.celrep.2016.04.085. Epub 2016 May 19.
8
Chromosome conformation capture technologies and their impact in understanding genome function.染色体构象捕获技术及其在理解基因组功能方面的影响。
Chromosoma. 2017 Feb;126(1):33-44. doi: 10.1007/s00412-016-0593-6. Epub 2016 Apr 30.
9
PARP1 Links CHD2-Mediated Chromatin Expansion and H3.3 Deposition to DNA Repair by Non-homologous End-Joining.聚(ADP-核糖)聚合酶1(PARP1)将CHD2介导的染色质扩张和H3.3沉积与非同源末端连接的DNA修复联系起来。
Mol Cell. 2016 Feb 18;61(4):547-562. doi: 10.1016/j.molcel.2016.01.019.
10
Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome.紫外线损伤DNA结合蛋白(UV-DDB)在核小体中识别嘧啶 - 嘧啶酮(6-4)光产物的结构基础
Sci Rep. 2015 Nov 17;5:16330. doi: 10.1038/srep16330.