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Genome Announc. 2017 Mar 2;5(9):e01754-16. doi: 10.1128/genomeA.01754-16.
2
Identification and Pathogenic Potential of Clinical Bacillus and Paenibacillus Isolates.临床芽孢杆菌属和类芽孢杆菌属分离株的鉴定及致病潜力
PLoS One. 2016 Mar 31;11(3):e0152831. doi: 10.1371/journal.pone.0152831. eCollection 2016.
3
Genomic characterization and assessment of the virulence and antibiotic resistance of the novel species Paenibacillus sp. strain VT-400, a potentially pathogenic bacterium in the oral cavity of patients with hematological malignancies.新型物种嗜麦芽窄食单胞菌VT-400菌株的基因组特征分析及其毒力和抗生素耐药性评估，该菌株是血液系统恶性肿瘤患者口腔中的一种潜在病原菌。
Gut Pathog. 2016 Feb 19;8:6. doi: 10.1186/s13099-016-0089-1. eCollection 2016.
4
Colorectal cancer: role of commensal bacteria and bystander effects.结直肠癌：共生细菌的作用及旁观者效应
Gut Microbes. 2015;6(6):370-6. doi: 10.1080/19490976.2015.1103426.
5
Complete Genome Sequence of Paenibacillus sp. Strain VT 400, Isolated from the Saliva of a Child with Acute Lymphoblastic Leukemia.从一名急性淋巴细胞白血病患儿唾液中分离出的类芽孢杆菌属VT 400菌株的全基因组序列
Genome Announc. 2015 Aug 13;3(4):e00894-15. doi: 10.1128/genomeA.00894-15.
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Complete Genome Sequence of Bacilli bacterium Strain VT-13-104 Isolated from the Intestine of a Patient with Duodenal Cancer.从一名十二指肠癌患者肠道中分离出的芽孢杆菌菌株VT-13-104的全基因组序列
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7
Computationally identifying virulence factors based on KEGG pathways.基于KEGG通路通过计算识别毒力因子。
Mol Biosyst. 2013 Jun;9(6):1447-52. doi: 10.1039/c3mb70024k. Epub 2013 Mar 21.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison.通过基因组到基因组序列比较进行数字DNA-DNA杂交以界定微生物物种
Stand Genomic Sci. 2010 Jan 28;2(1):117-34. doi: 10.4056/sigs.531120.
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Bacillus cereus, a volatile human pathogen.蜡样芽胞杆菌，一种易变的人类病原体。
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从慢性阻塞性肺疾病患者支气管肺泡灌洗液中分离出的VT-16-64的基因组序列草图

Draft Genome Sequence of VT-16-64, Isolated from the Bronchiolar Alveolar Lavage Fluid of a Patient with Chronic Obstructive Pulmonary Disease.

作者信息

Tetz Victor, Tetz George

机构信息

Human Microbiology Institute, New York, New York, USA.

Human Microbiology Institute, New York, New York, USA

出版信息

Genome Announc. 2017 Apr 27;5(17):e00264-17. doi: 10.1128/genomeA.00264-17.

DOI:10.1128/genomeA.00264-17
PMID:28450522
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5408120/
Abstract

We report here the draft genome sequence of VT-16-64, a novel spore-forming bacterium isolated from the bronchiolar alveolar lavage fluid of a patient with chronic obstructive pulmonary disease. The genome was comprised 4,831,386 bp with 4,399 predicted protein-coding genes, including those associated with antibiotic resistance and virulence.

摘要

我们在此报告VT-16-64的基因组序列草图，VT-16-64是从一名慢性阻塞性肺疾病患者的支气管肺泡灌洗液中分离出的一种新型产芽孢细菌。该基因组由4,831,386个碱基对组成，有4,399个预测的蛋白质编码基因，包括那些与抗生素耐药性和毒力相关的基因。