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利用疾病相关基因对散发性肌萎缩侧索硬化症进行分子分类

Molecular Taxonomy of Sporadic Amyotrophic Lateral Sclerosis Using Disease-Associated Genes.

作者信息

Morello Giovanna, Spampinato Antonio Gianmaria, Cavallaro Sebastiano

机构信息

Institute of Neurological Sciences, Italian National Research Council, Catania, Italy.

出版信息

Front Neurol. 2017 Apr 19;8:152. doi: 10.3389/fneur.2017.00152. eCollection 2017.

Abstract

Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease characterized by selective loss of upper and lower motor neurons. Despite intensive research, the origin and progression of ALS remain largely unknown, suggesting that the traditional clinical diagnosis and treatment strategies might not be adequate to completely capture the molecular complexity underlying the disease. In our previous work, comprehensive genomic profiling of 41 motor cortex samples enabled to discriminate control from sporadic ALS patients and segregated these latter into two distinct subgroups, each associated with different deregulated genes and pathways. Interestingly, some deregulated genes in sporadic ALS were previously associated with familiar ALS, indicating shared pathogenic mechanisms between the two forms of disease. In this, we performed cluster analysis on the same whole-genome expression profiles using a restricted (203) subset of genes extensively implicated in monogenic forms of ALS. Surprisingly, this short and unbiased gene list was sufficiently representative to allow the accurate separation of SALS patients from controls and the stratification of SALS patients into two molecularly distinct subgroups. Overall, our findings support the existence of a molecular taxonomy for ALS and represent a further step toward the establishment of a molecular-based diagnosis and patient-tailored therapies.

摘要

肌萎缩侧索硬化症(ALS)是一种致命的神经退行性疾病,其特征是上下运动神经元选择性丧失。尽管进行了深入研究,但ALS的起源和进展在很大程度上仍然未知,这表明传统的临床诊断和治疗策略可能不足以完全捕捉该疾病潜在的分子复杂性。在我们之前的工作中,对41个运动皮层样本进行全面的基因组分析,能够区分对照与散发性ALS患者,并将后者分为两个不同的亚组,每个亚组都与不同的失调基因和通路相关。有趣的是,散发性ALS中一些失调的基因以前与家族性ALS相关,表明这两种疾病形式之间存在共同的致病机制。在此,我们使用广泛涉及单基因形式ALS的有限(203个)基因子集,对相同的全基因组表达谱进行聚类分析。令人惊讶的是,这个简短且无偏倚的基因列表具有足够的代表性,能够准确地将SALS患者与对照区分开来,并将SALS患者分层为两个分子上不同的亚组。总体而言,我们的研究结果支持存在ALS的分子分类法,并代表了朝着建立基于分子的诊断和针对患者的治疗方法迈出的又一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e0/5395696/2138342b41ce/fneur-08-00152-g001.jpg

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