FnrL和三种Dnr调节因子用于对……低氧张力的代谢适应。 (原文句子不完整,“in”后面缺少具体内容)

FnrL and Three Dnr Regulators Are Used for the Metabolic Adaptation to Low Oxygen Tension in .

作者信息

Ebert Matthias, Laaß Sebastian, Thürmer Andrea, Roselius Louisa, Eckweiler Denitsa, Daniel Rolf, Härtig Elisabeth, Jahn Dieter

机构信息

Institute of Microbiology, Technische Universität BraunschweigBraunschweig, Germany.

Institute for Molecular Biosciences, Goethe-University FrankfurtFrankfurt, Germany.

出版信息

Front Microbiol. 2017 Apr 20;8:642. doi: 10.3389/fmicb.2017.00642. eCollection 2017.

Abstract

The heterotrophic marine bacterium utilizes aerobic respiration and anaerobic denitrification supplemented with aerobic anoxygenic photosynthesis for energy generation. The aerobic to anaerobic transition is controlled by four Fnr/Crp family regulators in a unique cascade-type regulatory network. FnrL is utilizing an oxygen-sensitive Fe-S cluster for oxygen sensing. Active FnrL is inducing most operons encoding the denitrification machinery and the corresponding heme biosynthesis. Activation of gene expression of the high oxygen affinity -type and repression of the low affinity -type cytochrome c oxidase is mediated by FnrL. Five regulator genes including and are directly controlled by FnrL. Multiple genes of the universal stress protein (USP) and cold shock response are further FnrL targets. DnrD, most likely sensing NO via a heme cofactor, co-induces genes of denitrification, heme biosynthesis, and the regulator genes and . DnrE is controlling genes for a putative Na/H antiporter, indicating a potential role of a Na gradient under anaerobic conditions. The formation of the electron donating primary dehydrogenases is coordinated by FnrL and DnrE. Many plasmid encoded genes were DnrE regulated. DnrF is controlling directly two regulator genes including the Fe-S cluster biosynthesis regulator , genes of the electron transport chain and the glutathione metabolism. The genes for nitrate reductase and CO dehydrogenase are repressed by DnrD and DnrF. Both regulators in concert with FnrL are inducing the photosynthesis genes. One of the major denitrification operon control regions, the intergenic region between and , contains one Fnr/Dnr binding site. Using regulator gene mutant strains, reporter gene fusions in combination with promoter mutagenesis, the function of the single Fnr/Dnr binding site for FnrL-, DnrD-, and partly DnrF-dependent and transcriptional activation was shown. Overall, the unique regulatory network of the marine bacterium for the transition from aerobic to anaerobic growth composed of four Crp/Fnr family regulators was elucidated.

摘要

这种异养海洋细菌利用有氧呼吸、厌氧反硝化作用以及有氧不产氧光合作用来产生能量。从需氧到厌氧的转变由四个Fnr/Crp家族调节因子在一个独特的级联式调控网络中控制。FnrL利用一个对氧敏感的铁硫簇进行氧感应。活性FnrL诱导大多数编码反硝化机制和相应血红素生物合成的操纵子。高氧亲和力型细胞色素c氧化酶基因表达的激活和低亲和力型细胞色素c氧化酶基因表达的抑制由FnrL介导。包括[具体基因名称]和[具体基因名称]在内的五个调节基因直接受FnrL控制。通用应激蛋白(USP)和冷休克反应的多个基因也是FnrL的作用靶点。DnrD很可能通过一个血红素辅因子感应一氧化氮,共同诱导反硝化、血红素生物合成以及调节基因[具体基因名称]和[具体基因名称]的基因表达。DnrE控制一个假定的Na/H逆向转运蛋白的基因,表明在厌氧条件下Na梯度可能发挥作用。供电子初级脱氢酶的形成由FnrL和DnrE协调。许多质粒编码基因受DnrE调控。DnrF直接控制包括铁硫簇生物合成调节因子[具体基因名称]在内的两个调节基因、电子传递链基因和谷胱甘肽代谢基因。硝酸还原酶和CO脱氢酶的基因受DnrD和DnrF抑制。这两个调节因子与FnrL协同诱导光合作用基因。主要的反硝化操纵子控制区域之一,即[具体基因名称]和[具体基因名称]之间的基因间区域,包含一个Fnr/Dnr结合位点。利用调节基因突变菌株、报告基因融合以及启动子诱变,证明了单个Fnr/Dnr结合位点对FnrL、DnrD以及部分DnrF依赖的[具体基因名称]和[具体基因名称]转录激活的功能。总体而言,阐明了这种海洋细菌从需氧生长到厌氧生长转变的由四个Crp/Fnr家族调节因子组成的独特调控网络。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09f3/5398030/ee63594390ae/fmicb-08-00642-g0001.jpg

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