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翻译过程中保真度和速度的动态基础:延伸与终止的协同多步机制

Dynamic basis of fidelity and speed in translation: Coordinated multistep mechanisms of elongation and termination.

作者信息

Prabhakar Arjun, Choi Junhong, Wang Jinfan, Petrov Alexey, Puglisi Joseph D

机构信息

Department of Structural Biology, Stanford University School of Medicine, Stanford, California, 94305.

Program in Biophysics, Stanford University, Stanford, California, 94305.

出版信息

Protein Sci. 2017 Jul;26(7):1352-1362. doi: 10.1002/pro.3190. Epub 2017 May 23.

Abstract

As the universal machine that transfers genetic information from RNA to protein, the ribosome synthesizes proteins with remarkably high fidelity and speed. This is a result of the accurate and efficient decoding of mRNA codons via multistep mechanisms during elongation and termination stages of translation. These mechanisms control how the correct sense codon is recognized by a tRNA for peptide elongation, how the next codon is presented to the decoding center without change of frame during translocation, and how the stop codon is discriminated for timely release of the nascent peptide. These processes occur efficiently through coupling of chemical energy expenditure, ligand interactions, and conformational changes. Understanding this coupling in detail required integration of many techniques that were developed in the past two decades. This multidisciplinary approach has revealed the dynamic nature of translational control and uncovered how external cellular factors such as tRNA abundance and mRNA modifications affect the synthesis of the protein product. Insights from these studies will aid synthetic biology and therapeutic approaches to translation.

摘要

作为将遗传信息从RNA传递到蛋白质的通用机器,核糖体以极高的保真度和速度合成蛋白质。这是在翻译的延伸和终止阶段通过多步机制对mRNA密码子进行准确而高效解码的结果。这些机制控制着在肽链延伸过程中tRNA如何识别正确的有义密码子,在转位过程中如何将下一个密码子呈递给解码中心而不改变读框,以及如何识别终止密码子以便及时释放新生肽链。这些过程通过化学能量消耗、配体相互作用和构象变化的耦合高效发生。要详细理解这种耦合需要整合过去二十年中开发的许多技术。这种多学科方法揭示了翻译控制的动态本质,并揭示了诸如tRNA丰度和mRNA修饰等外部细胞因素如何影响蛋白质产物的合成。这些研究的见解将有助于合成生物学和翻译治疗方法。

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