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一种用互补DNA探针释放病毒核酸以检测水样的新方法。

A novel method for liberating viral nucleic acid for assay of water samples with cDNA probes.

作者信息

Richardson K J, Margolin A B, Gerba C P

机构信息

Department of Microbiology and Immunology, University of Arizona, Tucson 85721.

出版信息

J Virol Methods. 1988 Oct;22(1):13-21. doi: 10.1016/0166-0934(88)90083-3.

DOI:10.1016/0166-0934(88)90083-3
PMID:2848856
Abstract

Rapid and sensitive methods are needed for the detection of enteric viruses to ensure proper drinking water quality. Gene probes have been shown to be useful for this purpose. Previously, samples to be assayed were treated with a series of phenol-chloroform extractions to release the viral nucleic acid. We have developed a more rapid procedure for liberating or exposing the genome of poliovirus for probing. In this study, a poliovirus model was used to test the ability of heat (65 degrees C for 30 min) for release or exposure of viral nucleic acid. Several different RNase inhibitors were tested for their ability to prevent viral RNA degradation. A comparison of the two methods indicates phenol-chloroform extraction is not necessary before probing. In addition to saving 2-4 h of time, maximum sensitivity levels were consistently obtained using this novel procedure.

摘要

为确保饮用水质量,需要快速灵敏的方法来检测肠道病毒。基因探针已被证明可用于此目的。以前,待检测的样本要用一系列苯酚 - 氯仿萃取法来释放病毒核酸。我们已开发出一种更快速的程序来释放或暴露脊髓灰质炎病毒的基因组以便进行探测。在本研究中,使用脊髓灰质炎病毒模型来测试加热(65摄氏度30分钟)释放或暴露病毒核酸的能力。测试了几种不同的核糖核酸酶抑制剂防止病毒RNA降解的能力。两种方法的比较表明,探测前无需进行苯酚 - 氯仿萃取。除了节省2 - 4小时时间外,使用这种新程序始终能获得最高灵敏度水平。

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引用本文的文献

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Pathogenic human viruses in coastal waters.沿海水域中的致病性人类病毒。
Clin Microbiol Rev. 2003 Jan;16(1):129-43. doi: 10.1128/CMR.16.1.129-143.2003.
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Evaluation of radioactive and nonradioactive gene probes and cell culture for detection of poliovirus in water samples.
评估放射性和非放射性基因探针及细胞培养用于检测水样中脊髓灰质炎病毒的情况。
Appl Environ Microbiol. 1993 Sep;59(9):3145-6. doi: 10.1128/aem.59.9.3145-3146.1993.