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翻译调控:再次向病毒学习。

Translation control: Learning from viruses, again.

作者信息

Díez Juana, Jungfleisch Jennifer

机构信息

a Molecular Virology Group, Department of Experimental and Health Sciences , Universitat Pompeu Fabra , Barcelona , Spain.

出版信息

RNA Biol. 2017 Jul 3;14(7):835-837. doi: 10.1080/15476286.2017.1325068. Epub 2017 May 10.

DOI:10.1080/15476286.2017.1325068
PMID:28488947
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5546540/
Abstract

Viruses are powerful tools to uncover cellular processes. Through viral studies we have recently identified a novel translational control mechanism that involves the DEAD-box helicase Dhh1/DDX6 and RNA folding within coding sequences (CDSs). All Dhh1-dependent mRNAs, viral and cellular ones, (i) contain long and highly structured CDSs, (ii) are directly bound by Dhh1 with a specific pattern, (iii) are activated at the translation initiation step and (iv) express proteins associated with the endoplasmic reticulum. The obtained results uncover a novel layer of translation regulation associated with translation at the endoplasmic reticulum conserved from yeast to humans and hijacked by viruses.

摘要

病毒是揭示细胞过程的有力工具。通过病毒研究,我们最近发现了一种新的翻译控制机制,该机制涉及DEAD-box解旋酶Dhh1/DDX6以及编码序列(CDS)内的RNA折叠。所有依赖Dhh1的mRNA,包括病毒和细胞来源的,(i)含有长且高度结构化的CDS,(ii)以特定模式直接与Dhh1结合,(iii)在翻译起始步骤被激活,并且(iv)表达与内质网相关的蛋白质。所获得的结果揭示了一层新的翻译调控,它与内质网上的翻译相关,从酵母到人类均保守存在,并被病毒利用。

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Translation control: Learning from viruses, again.翻译调控:再次向病毒学习。
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引用本文的文献

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Conserved Secondary Structures in Viral mRNAs.病毒 mRNAs 中的保守二级结构。
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本文引用的文献

1
A novel translational control mechanism involving RNA structures within coding sequences.一种涉及编码序列内RNA结构的新型翻译控制机制。
Genome Res. 2017 Jan;27(1):95-106. doi: 10.1101/gr.209015.116. Epub 2016 Nov 7.
2
Cotranslational signal-independent SRP preloading during membrane targeting.膜靶向过程中与共翻译信号无关的信号识别颗粒预装载
Nature. 2016 Aug 11;536(7615):224-8. doi: 10.1038/nature19309. Epub 2016 Aug 3.
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Opportunistic intruders: how viruses orchestrate ER functions to infect cells.机会主义入侵者:病毒如何操控内质网功能以感染细胞。
Nat Rev Microbiol. 2016 Jul;14(7):407-420. doi: 10.1038/nrmicro.2016.60. Epub 2016 Jun 6.
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The Coding Region of the HCV Genome Contains a Network of Regulatory RNA Structures.丙型肝炎病毒基因组的编码区包含一个调控RNA结构网络。
Mol Cell. 2016 Apr 7;62(1):111-20. doi: 10.1016/j.molcel.2016.01.024. Epub 2016 Feb 25.
5
Positive feedback of DDX6/c-Myc/PTB1 regulated by miR-124 contributes to maintenance of the Warburg effect in colon cancer cells.由miR-124调控的DDX6/c-Myc/PTB1的正反馈有助于维持结肠癌细胞中的瓦伯格效应。
Biochim Biophys Acta. 2015 Sep;1852(9):1971-80. doi: 10.1016/j.bbadis.2015.06.022. Epub 2015 Jul 2.
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Genome-wide analysis of translational efficiency reveals distinct but overlapping functions of yeast DEAD-box RNA helicases Ded1 and eIF4A.全基因组翻译效率分析揭示了酵母DEAD盒RNA解旋酶Ded1和eIF4A不同但重叠的功能。
Genome Res. 2015 Aug;25(8):1196-205. doi: 10.1101/gr.191601.115. Epub 2015 Jun 29.
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The Lsm1-7-Pat1 complex promotes viral RNA translation and replication by differential mechanisms.Lsm1-7-Pat1复合物通过不同机制促进病毒RNA的翻译和复制。
RNA. 2015 Aug;21(8):1469-79. doi: 10.1261/rna.052209.115. Epub 2015 Jun 19.
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Diversity and selectivity in mRNA translation on the endoplasmic reticulum.内质网上mRNA翻译的多样性与选择性
Nat Rev Mol Cell Biol. 2015 Apr;16(4):221-31. doi: 10.1038/nrm3958. Epub 2015 Mar 4.
9
A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing.DDX6-CNOT1 复合物和 CNOT9 的 W 结合口袋揭示了 miRNA 靶标识别和沉默之间的直接联系。
Mol Cell. 2014 Jun 5;54(5):737-50. doi: 10.1016/j.molcel.2014.03.034. Epub 2014 Apr 24.
10
Structural and biochemical insights to the role of the CCR4-NOT complex and DDX6 ATPase in microRNA repression.CCR4-NOT 复合物和 DDX6 ATP 酶在 microRNA 抑制中的结构和生化作用的深入了解。
Mol Cell. 2014 Jun 5;54(5):751-65. doi: 10.1016/j.molcel.2014.03.036. Epub 2014 Apr 24.