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通过合成宏基因组学方法获得的一种耐呋喃醛β-木糖苷酶/α-阿拉伯糖苷酶的特性分析

Characterization of a furan aldehyde-tolerant β-xylosidase/α-arabinosidase obtained through a synthetic metagenomics approach.

作者信息

Maruthamuthu M, Jiménez D J, van Elsas J D

机构信息

Cluster of Microbial Ecology, Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, The Netherlands.

出版信息

J Appl Microbiol. 2017 Jul;123(1):145-158. doi: 10.1111/jam.13484. Epub 2017 Jun 9.

Abstract

AIMS

The aim of the study was to characterize 10 hemicellulolytic enzymes obtained from a wheat straw-degrading microbial consortium.

METHODS AND RESULTS

Based on previous metagenomics analyses, 10 glycosyl hydrolases were selected, codon-optimized, synthetized, cloned and expressed in Escherichia coli. Nine of the overexpressed recombinant proteins accumulated in cellular inclusion bodies, whereas one, a 37·5-kDa protein encoded by gene xylM1989, was found in the soluble fractions. The resulting protein, denoted XylM1989, showed β-xylosidase and α-arabinosidase activities. It fell in the GH43 family and resembled a Sphingobacterium sp. protein. The XylM1989 showed optimum activity at 20°C and pH 8·0. Interestingly, it kept approximately 80% of its β-xylosidase activity in the presence of 0·5% (w/v) furfural and 0·1% (w/v) 5-hydroxymethylfurfural. Additionally, the presence of Ca , Mg and Mn ions increased the enzymatic activity and conferred complete tolerance to 500 mmol l of xylose. Protein XylM1989 is also able to release sugars from complex polysaccharides.

CONCLUSION

We report the characterization of a novel bifunctional hemicellulolytic enzyme obtained through a targeted synthetic metagenomics approach.

SIGNIFICANCE AND IMPACT OF THE STUDY

The properties of XylM1989 turn this protein into a promising enzyme that could be useful for the efficient saccharification of plant biomass.

摘要

目的

本研究旨在对从一个降解小麦秸秆的微生物群落中获得的10种半纤维素分解酶进行特性分析。

方法与结果

基于之前的宏基因组学分析,选择了10种糖基水解酶,对其进行密码子优化、合成、克隆并在大肠杆菌中表达。9种过表达的重组蛋白在细胞包涵体中积累,而一种由基因xylM1989编码的37.5 kDa蛋白存在于可溶性部分。所得的蛋白命名为XylM1989,具有β-木糖苷酶和α-阿拉伯糖苷酶活性。它属于GH43家族,与一种鞘氨醇杆菌属的蛋白相似。XylM1989在20°C和pH 8.0时表现出最佳活性。有趣的是,在存在0.5%(w/v)糠醛和0.1%(w/v)5-羟甲基糠醛的情况下,它仍保留约80%的β-木糖苷酶活性。此外,Ca²⁺、Mg²⁺和Mn²⁺离子的存在增加了酶活性,并赋予了对500 mmol/L木糖的完全耐受性。蛋白XylM1989也能够从复杂多糖中释放糖类。

结论

我们报道了通过靶向合成宏基因组学方法获得的一种新型双功能半纤维素分解酶的特性。

研究的意义和影响

XylM1989的特性使其成为一种有前途的酶,可用于植物生物质的高效糖化。

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