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降低N-聚糖的宏观和微观异质性,使得人L-选择素的凝集素和表皮生长因子样结构域的晶体结构能够在1.9 Å分辨率下得到解析。

Reducing Macro- and Microheterogeneity of N-Glycans Enables the Crystal Structure of the Lectin and EGF-Like Domains of Human L-Selectin To Be Solved at 1.9 Å Resolution.

作者信息

Wedepohl Stefanie, Dernedde Jens, Vahedi-Faridi Ardeschir, Tauber Rudolf, Saenger Wolfram, Bulut Haydar

机构信息

Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie, Charité Universitätsmedizin Berlin, CVK, Augustenburger Platz 1, 13353, Berlin, Germany.

Institut für Chemie und Biochemie/Kristallographie, Freie Universität Berlin, Takustrasse 6, 14195, Berlin, Germany.

出版信息

Chembiochem. 2017 Jul 4;18(13):1338-1345. doi: 10.1002/cbic.201700220. Epub 2017 Jun 6.

Abstract

L-Selectin, a cell-adhesion receptor on the surface of most leukocytes, contains seven N-glycosylation sites. In order to obtain the crystal structure of human L-selectin, we expressed a shortened version of L-selectin comprising the C-type lectin and EGF-like domains (termed LE) and systematically analysed mutations of the three glycosylation sites (Asn22, Asn66 and Asn139) in order to reduce macroheterogeneity. After we further removed microheterogeneity, we obtained crystals that diffracted X-rays up to 1.9 Å from a variant (LE010) with exchanges N22Q and N139Q and one GlcNAc Man N-glycan chain attached to Asn66. Crystal-structure analysis showed that the terminal mannose of GlcNAc Man of one LE010 molecule was coordinated to Ca in the binding site of a symmetry-related LE010. The orientation of the lectin and EGF-like domain was similar to the described "bent" conformation of E- and P-selectins. The Ca -binding site reflects the binding mode seen in E- and P-selectin structures co-crystallised with ligands.

摘要

L-选择素是大多数白细胞表面的一种细胞黏附受体,含有7个N-糖基化位点。为了获得人L-选择素的晶体结构,我们表达了一种缩短版的L-选择素,其包含C型凝集素和表皮生长因子样结构域(称为LE),并系统分析了三个糖基化位点(Asn22、Asn66和Asn139)的突变,以减少宏观异质性。在进一步消除微观异质性后,我们从具有N22Q和N139Q交换且一个GlcNAc Man N-聚糖链连接到Asn66的变体(LE010)中获得了X射线衍射至1.9 Å的晶体。晶体结构分析表明,一个LE010分子的GlcNAc Man的末端甘露糖与对称相关的LE010结合位点中的Ca配位。凝集素和表皮生长因子样结构域的取向类似于所描述的E-选择素和P-选择素的“弯曲”构象。Ca结合位点反映了与配体共结晶的E-选择素和P-选择素结构中所见的结合模式。

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