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深度测序揭示了间充质干细胞在视黄酸诱导的神经元分化过程中miRNA调控的复杂机制。

Deep sequencing reveals complex mechanisms of microRNA regulation during retinoic acid-induced neuronal differentiation of mesenchymal stem cells.

作者信息

Hu Feihu, Xu Peng, Sun Bo, Teng Gaojun, Xiao Zhongdang

机构信息

State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, Jiangsu, China; Medical School, Southeast University, Nanjing, Jiangsu, China.

State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, Jiangsu, China.

出版信息

Genomics. 2017 Jul;109(3-4):302-311. doi: 10.1016/j.ygeno.2017.05.004. Epub 2017 May 12.

Abstract

Retinoic acid (RA) has an important role in nervous system development; exogenous RA could induce stem cells towards neural lineage cells. However, the miRNA regulation mechanism and biological process of this induction require further exploration. In this study, using high-throughput sequencing results, we evaluated the microRNA profiles of neurally differentiated adipose-derived mesenchymal stem cells (ASCs), summarized several crucial microRNAs that profoundly contributed to the differentiation process, and speculated that several miRNAs were likely to mimic RA or other factors to induce the neuronal differentiation of stem cells. The GO terms and KEGG PATHWAY in the DAVID tool were used to elucidate the biological process of RA induction. Finally, we described a network for clarifying the relationship among the miRNAs, target genes and signaling pathways. These findings will be beneficial for understanding the induction mechanism and supporting the application of RA in stem cell transformation.

摘要

视黄酸(RA)在神经系统发育中具有重要作用;外源性RA可诱导干细胞向神经谱系细胞分化。然而,这种诱导的miRNA调控机制和生物学过程仍需进一步探索。在本研究中,利用高通量测序结果,我们评估了神经分化的脂肪来源间充质干细胞(ASC)的微小RNA谱,总结了几个对分化过程有深远影响的关键微小RNA,并推测几种miRNA可能模拟RA或其他因子来诱导干细胞的神经元分化。使用DAVID工具中的GO术语和KEGG通路来阐明RA诱导的生物学过程。最后,我们描述了一个网络,以阐明miRNA、靶基因和信号通路之间的关系。这些发现将有助于理解诱导机制,并支持RA在干细胞转化中的应用。

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