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从基因组到表型组:利用动物模型对创伤后应激障碍进行系统生物学研究的方法

Genome to Phenome: A Systems Biology Approach to PTSD Using an Animal Model.

作者信息

Chakraborty Nabarun, Meyerhoff James, Jett Marti, Hammamieh Rasha

机构信息

Integrative Systems Biology, Geneva Foundation, USACEHR, 568 Doughten Drive, Fredrick, MD, 21702-5010, USA.

Integrative Systems Biology, US Army Center for Environmental Health Research, USACEHR, 568 Doughten Drive, Frederick, MD, 21702-5010, USA.

出版信息

Methods Mol Biol. 2017;1598:117-154. doi: 10.1007/978-1-4939-6952-4_6.

Abstract

Post-traumatic stress disorder (PTSD) is a debilitating illness that imposes significant emotional and financial burdens on military families. The understanding of PTSD etiology remains elusive; nonetheless, it is clear that PTSD is manifested by a cluster of symptoms including hyperarousal, reexperiencing of traumatic events, and avoidance of trauma reminders. With these characteristics in mind, several rodent models have been developed eliciting PTSD-like features. Animal models with social dimensions are of particular interest, since the social context plays a major role in the development and manifestation of PTSD.For civilians, a core trauma that elicits PTSD might be characterized by a singular life-threatening event such as a car accident. In contrast, among war veterans, PTSD might be triggered by repeated threats and a cumulative psychological burden that coalesced in the combat zone. In capturing this fundamental difference, the aggressor-exposed social stress (Agg-E SS) model imposes highly threatening conspecific trauma on naïve mice repeatedly and randomly.There is abundant evidence that suggests the potential role of genetic contributions to risk factors for PTSD. Specific observations include putatively heritable attributes of the disorder, the cited cases of atypical brain morphology, and the observed neuroendocrine shifts away from normative. Taken together, these features underscore the importance of multi-omics investigations to develop a comprehensive picture. More daunting will be the task of downstream analysis with integration of these heterogeneous genotypic and phenotypic data types to deliver putative clinical biomarkers. Researchers are advocating for a systems biology approach, which has demonstrated an increasingly robust potential for integrating multidisciplinary data. By applying a systems biology approach here, we have connected the tissue-specific molecular perturbations to the behaviors displayed by mice subjected to Agg-E SS. A molecular pattern that links the atypical fear plasticity to energy deficiency was thereby identified to be causally associated with many behavioral shifts and transformations.PTSD is a multifactorial illness sensitive to environmental influence. Accordingly, it is essential to employ the optimal animal model approximating the environmental condition that elicits PTSD-like symptoms. Integration of an optimal animal model with a systems biology approach can contribute to a more knowledge-driven and efficient next-generation care management system and, potentially, prevention of PTSD.

摘要

创伤后应激障碍(PTSD)是一种使人衰弱的疾病,给军人家庭带来了巨大的情感和经济负担。对PTSD病因的理解仍然难以捉摸;尽管如此,很明显PTSD表现为一系列症状,包括过度觉醒、创伤事件的反复体验以及对创伤提示物的回避。考虑到这些特征,已经开发了几种引发类似PTSD特征的啮齿动物模型。具有社会维度的动物模型特别受关注,因为社会环境在PTSD的发展和表现中起着重要作用。对于平民来说,引发PTSD的核心创伤可能以诸如车祸等单一的危及生命的事件为特征。相比之下,在退伍军人中,PTSD可能由在战区反复出现的威胁和累积的心理负担引发。为了捕捉这一根本差异,暴露于攻击者的社会应激(Agg-E SS)模型反复随机地对天真的小鼠施加高度威胁性的同种创伤。有大量证据表明基因因素对PTSD风险因素的潜在作用。具体观察结果包括该疾病假定的可遗传属性、非典型脑形态的 cited 病例以及观察到的神经内分泌偏离正常状态。综上所述,这些特征强调了多组学研究对于形成全面图景的重要性。更具挑战性的将是下游分析任务,即整合这些异质的基因型和表型数据类型以提供假定的临床生物标志物。研究人员提倡采用系统生物学方法,该方法在整合多学科数据方面已显示出越来越强大的潜力。通过在此应用系统生物学方法,我们将组织特异性分子扰动与遭受Agg-E SS的小鼠所表现出的行为联系起来。由此确定了一种将非典型恐惧可塑性与能量缺乏联系起来的分子模式,该模式与许多行为转变和变化存在因果关联。PTSD是一种对环境影响敏感 的多因素疾病。因此,采用最接近引发类似PTSD症状的环境条件的最佳动物模型至关重要。将最佳动物模型与系统生物学方法相结合,有助于建立一个更具知识驱动性和高效性的下一代护理管理系统,并有可能预防PTSD。

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