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蛋白质-蛋白质相互作用网络分析揭示了创伤后应激障碍的新前景。

Protein-Protein Interaction Network Analysis Revealed a New Prospective of Posttraumatic Stress Disorder.

作者信息

Okhovatian Farshad, Rezaei Tavirani Mostafa, Rostami-Nejad Mohammad, Rezaei Tavirani Sina

机构信息

Physiotherapy Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Proteomics Research Center, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

出版信息

Galen Med J. 2018 May 29;7:e1137. doi: 10.22086/gmj.v0i0.1137. eCollection 2018.

Abstract

BACKGROUND

Posttraumatic stress disorder (PTSD) is known by a number of mental disorders, including recurring memories of trauma, mental appalling, and escaping of sign that make them recall the trauma in question. Clinical interviews serve as the main diagnostic tool for PTSD. With respect to treatment, either pharmacotherapy or psychotherapy or a combination of both is used as a therapeutic method for PTSD. In this study, a number of crucial genes related to PTSD, which can be considered as biomarker candidates, were represented.

MATERIALS AND METHODS

The genes related to PTSD were extracted from the STRING database and organized in a protein-protein interaction network with the help of Cytoscape software version 3.6.0. The network was analyzed, and the important genes were introduced based on central indices. The biological processes related to the crucial genes were enriched via gene ontology using ClueGO.

RESULTS

From a total of 100 genes, 63 genes were extracted that formed the main connected component, and of these, 12 crucial genes- and -were introduced. Biological processes were classified into the regulation of corticosterone, regulation of behavior, response to fungus, multicellular organism response to stress, and associative learning.

CONCLUSION

The introduced 12 crucial genes can be used as a biomarker panel related to PTSD and can be considered as a diagnostic reagent or drug target; however, more investigations are needed to use these genes as biomarkers.

摘要

背景

创伤后应激障碍(PTSD)以多种精神障碍为特征,包括创伤的反复记忆、精神恐惧以及逃避能使他们回想起相关创伤的迹象。临床访谈是PTSD的主要诊断工具。在治疗方面,药物治疗、心理治疗或两者结合都被用作PTSD的治疗方法。在本研究中,呈现了一些与PTSD相关的关键基因,这些基因可被视为生物标志物候选物。

材料与方法

从STRING数据库中提取与PTSD相关的基因,并借助Cytoscape 3.6.0软件将其组织成一个蛋白质 - 蛋白质相互作用网络。对该网络进行分析,并基于中心指标引入重要基因。使用ClueGO通过基因本体论对与关键基因相关的生物学过程进行富集。

结果

从总共100个基因中提取出63个基因,这些基因形成了主要连接组件,其中引入了12个关键基因。生物学过程被分类为皮质酮调节、行为调节、对真菌的反应、多细胞生物体对压力的反应以及联想学习。

结论

所引入的12个关键基因可作为与PTSD相关的生物标志物面板,并可被视为诊断试剂或药物靶点;然而,需要更多研究才能将这些基因用作生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6959/8344167/1c0f784a06b1/gmj-7-e1137-g001.jpg

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