Fast folding and slow unfolding of a resurrected Precambrian protein.
作者信息
Candel Adela M, Romero-Romero M Luisa, Gamiz-Arco Gloria, Ibarra-Molero Beatriz, Sanchez-Ruiz Jose M
机构信息
Departamento de Quimica Fisica, Facultad de Ciencias, Universidad de Granada, Granada 18071, Spain.
Departamento de Quimica Fisica, Facultad de Ciencias, Universidad de Granada, Granada 18071, Spain
出版信息
Proc Natl Acad Sci U S A. 2017 May 23;114(21):E4122-E4123. doi: 10.1073/pnas.1703227114. Epub 2017 May 16.
Abstract
摘要
相似文献
1
Fast folding and slow unfolding of a resurrected Precambrian protein.一种复活的前寒武纪蛋白质的快速折叠与缓慢解折叠
Proc Natl Acad Sci U S A. 2017 May 23;114(21):E4122-E4123. doi: 10.1073/pnas.1703227114. Epub 2017 May 16.
2
Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c: 1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102.自旋标记酵母异-1-细胞色素c的动力学和运动动力学：1. 停流电子顺磁共振作为探测在半胱氨酸102处自旋标记的C端螺旋蛋白质折叠/去折叠的探针
Biochemistry. 1997 Mar 11;36(10):2884-97. doi: 10.1021/bi962155i.
3
How do chemical denaturants affect the mechanical folding and unfolding of proteins?化学变性剂如何影响蛋白质的机械折叠与解折叠？
J Mol Biol. 2008 Jan 4;375(1):316-24. doi: 10.1016/j.jmb.2007.10.024. Epub 2007 Oct 15.
4
Folding of horse cytochrome c in the reduced state.还原态马细胞色素c的折叠
J Mol Biol. 2001 Oct 5;312(5):1135-60. doi: 10.1006/jmbi.2001.4993.
5
High-pressure denaturation of staphylococcal nuclease proline-to-glycine substitution mutants.葡萄球菌核酸酶脯氨酸到甘氨酸取代突变体的高压变性
Biochemistry. 1996 Mar 26;35(12):3857-64. doi: 10.1021/bi952012g.
6
Characterization of the folding and unfolding reactions of single-chain monellin: evidence for multiple intermediates and competing pathways.单链莫内林折叠与去折叠反应的表征：多中间体和竞争途径的证据
Biochemistry. 2007 Oct 23;46(42):11727-43. doi: 10.1021/bi701142a. Epub 2007 Sep 29.
7
Effect of signal peptide on the stability and folding kinetics of maltose binding protein.信号肽对麦芽糖结合蛋白稳定性和折叠动力学的影响。
Biochemistry. 2004 Mar 30;43(12):3608-19. doi: 10.1021/bi0360509.
8
Competition between DsbA-mediated oxidation and conformational folding of RTEM1 beta-lactamase.二硫键异构酶A（DsbA）介导的氧化与RTEM1β-内酰胺酶构象折叠之间的竞争
Biochemistry. 1996 Sep 3;35(35):11386-95. doi: 10.1021/bi9608525.
9
Folding dynamics of the src SH3 domain.src SH3结构域的折叠动力学
Biochemistry. 1997 Dec 16;36(50):15685-92. doi: 10.1021/bi971786p.
10
Kinetically robust monomeric protein from a hyperthermophile.来自嗜热菌的动力学稳定单体蛋白。
Biochemistry. 2004 Nov 2;43(43):13859-66. doi: 10.1021/bi0487645.
引用本文的文献
1
Engineering and screening of novel β-1,3-xylanases with desired hydrolysate type by optimized ancestor sequence reconstruction and data mining.通过优化祖先序列重建和数据挖掘对具有所需水解产物类型的新型β-1,3-木聚糖酶进行工程改造和筛选。
Comput Struct Biotechnol J. 2022 Jun 27;20:3313-3321. doi: 10.1016/j.csbj.2022.06.050. eCollection 2022.
2
Evolution, folding, and design of TIM barrels and related proteins.TIM 桶及相关蛋白的进化、折叠和设计。
Curr Opin Struct Biol. 2021 Jun;68:94-104. doi: 10.1016/j.sbi.2020.12.007. Epub 2021 Jan 13.
3
Non-conservation of folding rates in the thioredoxin family reveals degradation of ancestral unassisted-folding.硫氧还蛋白家族中折叠速率的非守恒性揭示了祖先无辅助折叠的降解。
Biochem J. 2019 Dec 12;476(23):3631-3647. doi: 10.1042/BCJ20190739.
4
Isolated domains of recombinant human apo-metallothionein 1A are folded at neutral pH: a denaturant and heat-induced unfolding study using ESI-MS.使用 ESI-MS 进行的变性剂和热诱导变性研究：重组人脱金属硫蛋白 1A 的孤立结构域在中性 pH 下折叠。
Biosci Rep. 2018 Jul 18;38(4). doi: 10.1042/BSR20180592. Print 2018 Aug 31.
5
Reply to Candel et al.: Evidence for evolutionary conservation of folding kinetics in the thioredoxin protein family.对坎德尔等人的回复：硫氧还蛋白家族折叠动力学进化保守性的证据。
Proc Natl Acad Sci U S A. 2017 May 23;114(21):E4124. doi: 10.1073/pnas.1704669114. Epub 2017 May 16.
本文引用的文献
1
Evidence for the principle of minimal frustration in the evolution of protein folding landscapes.蛋白质折叠景观进化中最小挫折原则的证据。
Proc Natl Acad Sci U S A. 2017 Feb 28;114(9):E1627-E1632. doi: 10.1073/pnas.1613892114. Epub 2017 Feb 14.
2
Selection for Protein Kinetic Stability Connects Denaturation Temperatures to Organismal Temperatures and Provides Clues to Archaean Life.对蛋白质动力学稳定性的选择将变性温度与生物体温度联系起来，并为太古宙生命提供线索。
PLoS One. 2016 Jun 2;11(6):e0156657. doi: 10.1371/journal.pone.0156657. eCollection 2016.
3
Mutational studies on resurrected ancestral proteins reveal conservation of site-specific amino acid preferences throughout evolutionary history.对复活的祖先蛋白质的突变研究揭示了在整个进化历史中位点特异性氨基酸偏好的保守性。
Mol Biol Evol. 2015 Feb;32(2):440-55. doi: 10.1093/molbev/msu312. Epub 2014 Nov 12.
4
Conservation of protein structure over four billion years.四十亿年来蛋白质结构的保守性。
Structure. 2013 Sep 3;21(9):1690-7. doi: 10.1016/j.str.2013.06.020. Epub 2013 Aug 8.
5
Single-molecule paleoenzymology probes the chemistry of resurrected enzymes.单分子古酶学探测复活酶的化学性质。
Nat Struct Mol Biol. 2011 May;18(5):592-6. doi: 10.1038/nsmb.2020. Epub 2011 Apr 3.
6
Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.对动力学稳定性的自然选择可能是序列比对中突变对蛋白质能量学的影响与氨基酸出现频率之间相关性的一个起源。
J Mol Biol. 2006 Oct 6;362(5):966-78. doi: 10.1016/j.jmb.2006.07.065. Epub 2006 Jul 31.
7
Proline isomerization-independent accumulation of an early intermediate and heterogeneity of the folding pathways of a mixed alpha/beta protein, Escherichia coli thioredoxin.脯氨酸异构化非依赖性早期中间体的积累以及混合α/β蛋白大肠杆菌硫氧还蛋白折叠途径的异质性
Biochemistry. 1998 Jul 14;37(28):10286-97. doi: 10.1021/bi9805083.
8
Are there equilibrium intermediate states in the urea-induced unfolding of hen egg-white lysozyme?在尿素诱导的鸡蛋清溶菌酶去折叠过程中是否存在平衡中间态？
Biochemistry. 1997 Aug 5;36(31):9616-24. doi: 10.1021/bi9703305.
9
Transient folding intermediates characterized by protein engineering.
Nature. 1990 Aug 2;346(6283):440-5. doi: 10.1038/346440a0.
10
The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding.一种酶的折叠。I. 蛋白质折叠稳定性及途径的蛋白质工程分析理论
J Mol Biol. 1992 Apr 5;224(3):771-82. doi: 10.1016/0022-2836(92)90561-w.
Zotero 插件