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小鼠血清外泌体小RNA含量的表征:其起源及其在调节炎症反应中的作用。

Characterization of mouse serum exosomal small RNA content: The origins and their roles in modulating inflammatory response.

作者信息

Zhou Xin, Jiao Zinan, Ji Juling, Li Shuyuan, Huang Xiaodi, Lu Xiaoshuang, Zhao Heng, Peng Jingwen, Chen Xinya, Ji Qiuhong, Ji Yuhua

机构信息

Institute of Immunology, College of Life science and Technology, Jinan University, Guangdong, China.

Department of Pathology, Medical School of Nantong University, Nantong, China.

出版信息

Oncotarget. 2017 Jun 27;8(26):42712-42727. doi: 10.18632/oncotarget.17448.

Abstract

In the last decade, although studies on exosomal microRNAs (miRNAs) derived from serum and other body fluids have increased dramatically; the contents and biological significance of serum exosomes under normal conditions remain unclear. In the present study, we profiled the small RNA content of mouse serum exosomes (mSEs) using small RNAseq and found that fragments of transfer RNAs (tRNAs) and miRNAs were the two predominant exosomal RNA species, accounting for approximately 60% and 10% of mapped reads, respectively. Moreover, 466 known and 5 novel miRNAs were identified from two independent experiments, among which the five most abundant miRNAs (miR-486a-5p, miR-22-3p, miR-16-5p, miR-10b-5p and miR-27b-3p) accounted for approximately 60% of all the aligned miRNA sequences. As inferred from the identities of the well known cell- or tissue-specific miRNAs, mSEs were primarily released by RBCs, liver and intestinal cells. Bioinformatics analysis revealed over half of the top 20 miRNAs by abundance were involved in inflammatory responses and further in vitro experiments demonstrated that mSEs potently primed macrophages towards the M2 phenotype. To the best of our knowledge, this is the first study to profile small RNAs from mSEs. In addition to providing a reference for future biomarker studies and extrapolating their origins, our data also suggest the roles of mSEs in maintaining internal homeostasis under normal conditions.

摘要

在过去十年中,尽管对源自血清和其他体液的外泌体微小RNA(miRNA)的研究急剧增加,但正常条件下血清外泌体的成分和生物学意义仍不清楚。在本研究中,我们使用小RNA测序对小鼠血清外泌体(mSE)的小RNA含量进行了分析,发现转运RNA(tRNA)片段和miRNA是外泌体中两种主要的RNA种类,分别占比对读数的约60%和10%。此外,从两个独立实验中鉴定出466种已知的和5种新的miRNA,其中丰度最高的5种miRNA(miR-486a-5p、miR-22-3p、miR-16-5p、miR-10b-5p和miR-27b-3p)约占所有比对miRNA序列的60%。从已知的细胞或组织特异性miRNA的特性推断,mSE主要由红细胞、肝脏和肠道细胞释放。生物信息学分析显示,丰度排名前20的miRNA中超过一半参与炎症反应,进一步的体外实验表明,mSE能有效地使巨噬细胞向M2表型极化。据我们所知,这是第一项对mSE中的小RNA进行分析的研究。除了为未来的生物标志物研究提供参考并推断其来源外,我们的数据还表明了mSE在正常条件下维持体内稳态中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0097/5522100/62d28494dcca/oncotarget-08-42712-g001.jpg

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