Louyakis Artemis S, Mobberley Jennifer M, Vitek Brooke E, Visscher Pieter T, Hagan Paul D, Reid R Pamela, Kozdon Reinhard, Orland Ian J, Valley John W, Planavsky Noah J, Casaburi Giorgio, Foster Jamie S
1 Department of Microbiology and Cell Science, University of Florida , Space Life Sciences Lab, Merritt Island, Florida.
2 Rosenstiel School of Marine and Atmospheric Science, University of Miami , Miami, Florida.
Astrobiology. 2017 May;17(5):413-430. doi: 10.1089/ast.2016.1563.
Thrombolites are buildups of carbonate that exhibit a clotted internal structure formed through the interactions of microbial mats and their environment. Despite recent advances, we are only beginning to understand the microbial and molecular processes associated with their formation. In this study, a spatial profile of the microbial and metabolic diversity of thrombolite-forming mats of Highborne Cay, The Bahamas, was generated by using 16S rRNA gene sequencing and predictive metagenomic analyses. These molecular-based approaches were complemented with microelectrode profiling and in situ stable isotope analysis to examine the dominant taxa and metabolic activities within the thrombolite-forming communities. Analyses revealed three distinctive zones within the thrombolite-forming mats that exhibited stratified populations of bacteria and archaea. Predictive metagenomics also revealed vertical profiles of metabolic capabilities, such as photosynthesis and carboxylic and fatty acid synthesis within the mats that had not been previously observed. The carbonate precipitates within the thrombolite-forming mats exhibited isotopic geochemical signatures suggesting that the precipitation within the Bahamian thrombolites is photosynthetically induced. Together, this study provides the first look at the spatial organization of the microbial populations within Bahamian thrombolites and enables the distribution of microbes to be correlated with their activities within modern thrombolite systems. Key Words: Thrombolites-Microbial diversity-Metagenome-Stable isotopes-Microbialites. Astrobiology 17, 413-430.
叠层石是碳酸盐的堆积物,其内部结构呈凝块状,是通过微生物席与其环境的相互作用形成的。尽管最近有了进展,但我们才刚刚开始了解与其形成相关的微生物和分子过程。在这项研究中,通过使用16S rRNA基因测序和预测性宏基因组分析,生成了巴哈马群岛高伯恩礁形成叠层石的微生物席的微生物和代谢多样性的空间分布图。这些基于分子的方法辅以微电极分析和原位稳定同位素分析,以研究形成叠层石的群落中的优势类群和代谢活动。分析揭示了形成叠层石的微生物席内有三个不同的区域,这些区域呈现出细菌和古菌的分层分布。预测性宏基因组学还揭示了代谢能力的垂直分布,例如在微生物席内光合作用以及羧酸和脂肪酸合成,这些都是以前未曾观察到的。形成叠层石的微生物席内的碳酸盐沉淀物呈现出同位素地球化学特征,表明巴哈马叠层石内的沉淀是由光合作用诱导的。总之,这项研究首次揭示了巴哈马叠层石内微生物种群的空间组织,并能够将微生物的分布与其在现代叠层石系统中的活动联系起来。关键词:叠层石 - 微生物多样性 - 宏基因组 - 稳定同位素 - 微生物岩。天体生物学17, 413 - 430。