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代数生物学模型中的遗传编码与联合超复数系统

Genetic coding and united-hypercomplex systems in the models of algebraic biology.

作者信息

Petoukhov Sergey V

机构信息

Mechanical Engineering Research Institute of the Russian Academy of Sciences, 101990, Moscow, Russia.

出版信息

Biosystems. 2017 Aug;158:31-46. doi: 10.1016/j.biosystems.2017.05.002. Epub 2017 May 20.

Abstract

Structured alphabets of DNA and RNA in their matrix form of representations are connected with Walsh functions and a new type of systems of multidimensional numbers. This type generalizes systems of complex numbers and hypercomplex numbers, which serve as the basis of mathematical natural sciences and many technologies. The new systems of multi-dimensional numbers have interesting mathematical properties and are called in a general case as "systems of united-hypercomplex numbers" (or briefly "U-hypercomplex numbers"). They can be widely used in models of multi-parametrical systems in the field of algebraic biology, artificial life, devices of biological inspired artificial intelligence, etc. In particular, an application of U-hypercomplex numbers reveals hidden properties of genetic alphabets under cyclic permutations in their doublets and triplets. A special attention is devoted to the author's hypothesis about a multi-linguistic in DNA-sequences in a relation with an ensemble of U-numerical sub-alphabets. Genetic multi-linguistic is considered as an important factor to provide noise-immunity properties of the multi-channel genetic coding. Our results attest to the conformity of the algebraic properties of the U-numerical systems with phenomenological properties of the DNA-alphabets and with the complementary device of the double DNA-helix. It seems that in the modeling field of algebraic biology the genetic-informational organization of living bodies can be considered as a set of united-hypercomplex numbers in some association with the famous slogan of Pythagoras "the numbers rule the world".

摘要

DNA和RNA以其矩阵表示形式存在的结构化字母表与沃尔什函数以及一种新型的多维数系统相关联。这种类型的系统推广了复数和超复数系统,而复数和超复数系统是数学自然科学和许多技术的基础。新的多维数系统具有有趣的数学性质,在一般情况下被称为“联合超复数系统”(或简称为“U超复数”)。它们可广泛应用于代数生物学、人工生命、生物启发式人工智能设备等领域的多参数系统模型中。特别是,U超复数的应用揭示了遗传字母表在其二联体和三联体的循环排列下的隐藏属性。作者特别关注关于DNA序列中多语言与U数值子字母表集合之间关系的假设。遗传多语言被视为提供多通道遗传编码抗噪声特性的一个重要因素。我们的结果证明了U数值系统的代数性质与DNA字母表的现象学性质以及双DNA螺旋的互补结构是一致的。在代数生物学的建模领域中,似乎生物体的遗传信息组织可以被视为一组联合超复数,这在某种程度上与毕达哥拉斯的著名口号“数统治世界”相关联。

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