UCL Institute of Ophthalmology, 11-43 Bath Street, London EC1V 9EL, UK.
UCL Institute of Ophthalmology, 11-43 Bath Street, London EC1V 9EL, UK.
Biochim Biophys Acta Mol Cell Res. 2017 Sep;1864(9):1439-1449. doi: 10.1016/j.bbamcr.2017.05.019. Epub 2017 May 26.
Tubular lipid binding proteins (TULIPs) have become a focus of interest in the cell biology of lipid signalling, lipid traffic and membrane contact sites. Each tubular domain has an internal pocket with a hydrophobic lining that can bind a hydrophobic molecule such as a lipid. This allows TULIP proteins to carry lipids through the aqueous phase. TULIP domains were first found in a large family of extracellular proteins related to the bacterial permeability-inducing protein (BPI) and cholesterol ester transfer protein (CETP). Since then, the same fold and lipid transfer capacity have been found in SMP domains (so-called for their occurrence in synaptotagmin, mitochondrial and lipid binding proteins), which localise to intracellular membrane contact sites. Here the methods for identifying known TULIPs are described, and used to find previously unreported TULIPs, one in the silk polymer and another in prokaryotes illustrated by the E. coli protein YceB. The bacterial TULIP alters views on the likely evolution of the domain, suggesting its presence in the last universal common ancestor. The major function of TULIPs is to handle lipids, but we still do not know how they work in detail, or how many more remain to be discovered. This article is part of a Special Issue entitled: Membrane Contact Sites edited by Christian Ungermann and Benoit Kornmann.
管状脂质结合蛋白(TULIPs)已成为脂质信号转导、脂质运输和膜接触位点细胞生物学的研究重点。每个管状结构域都有一个内部口袋,其内部有疏水衬里,可以结合疏水分子,如脂质。这使得 TULIP 蛋白能够将脂质穿过水相。TULIP 结构域最初是在与细菌通透性诱导蛋白(BPI)和胆固醇酯转移蛋白(CETP)相关的一大类细胞外蛋白中发现的。从那时起,在 SMP 结构域(因其在突触融合蛋白、线粒体和脂质结合蛋白中的存在而得名)中也发现了相同的折叠和脂质转移能力,这些 SMP 结构域定位于细胞内的膜接触位点。本文描述了鉴定已知 TULIPs 的方法,并利用这些方法发现了以前未报道的 TULIPs,一个在丝聚合物中,另一个在细菌中,由大肠杆菌蛋白 YceB 举例说明。细菌 TULIP 改变了人们对该结构域可能进化的看法,表明它存在于最后一个普遍共同祖先中。TULIPs 的主要功能是处理脂质,但我们仍然不清楚它们的详细工作原理,或者还有多少有待发现。本文是由 Christian Ungermann 和 Benoit Kornmann 编辑的特刊“膜接触位点”的一部分。