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N-(2-甲基-5'-吗啉基-6'-((四氢-2H-吡喃-4-基)氧基)-[3,3'-联吡啶]-5-基)-3-(三氟甲基)苯甲酰胺(RAF709)的设计与发现:一种针对 RAS 突变型癌症的强效、选择性和有效的 RAF 抑制剂。

Design and Discovery of N-(2-Methyl-5'-morpholino-6'-((tetrahydro-2H-pyran-4-yl)oxy)-[3,3'-bipyridin]-5-yl)-3-(trifluoromethyl)benzamide (RAF709): A Potent, Selective, and Efficacious RAF Inhibitor Targeting RAS Mutant Cancers.

机构信息

Global Discovery Chemistry, Novartis Institutes for BioMedical Research , 250 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.

Global Discovery Chemistry, Novartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.

出版信息

J Med Chem. 2017 Jun 22;60(12):4869-4881. doi: 10.1021/acs.jmedchem.6b01862. Epub 2017 Jun 8.

DOI:10.1021/acs.jmedchem.6b01862
PMID:28557458
Abstract

RAS oncogenes have been implicated in >30% of human cancers, all representing high unmet medical need. The exquisite dependency on CRAF kinase in KRAS mutant tumors has been established in genetically engineered mouse models and human tumor cells. To date, many small molecule approaches are under investigation to target CRAF, yet kinase-selective and cellular potent inhibitors remain challenging to identify. Herein, we describe 14 (RAF709) [ Aversa , Biaryl amide compounds as kinase inhibitors and their preparation . WO 2014151616, 2014 ], a selective B/C RAF inhibitor, which was developed through a hypothesis-driven approach focusing on drug-like properties. A key challenge encountered in the medicinal chemistry campaign was maintaining a balance between good solubility and potent cellular activity (suppression of pMEK and proliferation) in KRAS mutant tumor cell lines. We investigated the small molecule crystal structure of lead molecule 7 and hypothesized that disruption of the crystal packing would improve solubility, which led to a change from N-methylpyridone to a tetrahydropyranyl oxy-pyridine derivative. 14 proved to be soluble, kinase selective, and efficacious in a KRAS mutant xenograft model.

摘要

RAS 癌基因已被牵涉到超过 30%的人类癌症中,所有这些癌症都代表着高度未满足的医疗需求。在基因工程小鼠模型和人类肿瘤细胞中已经确定了 KRAS 突变肿瘤对 CRAF 激酶的精细依赖性。迄今为止,许多小分子方法正在被研究用于靶向 CRAF,但激酶选择性和细胞效力抑制剂仍然难以识别。在此,我们描述了 14(RAF709)[Aversa,作为激酶抑制剂的双芳基酰胺化合物及其制备。WO 2014151616,2014],一种选择性的 B/C RAF 抑制剂,它是通过专注于药物样特性的假设驱动方法开发的。在药物化学研究中遇到的一个关键挑战是在 KRAS 突变肿瘤细胞系中保持良好的溶解性和有效的细胞活性(抑制 pMEK 和增殖)之间的平衡。我们研究了先导化合物 7 的小分子晶体结构,并假设破坏晶体堆积会提高溶解度,这导致从 N-甲基吡啶酮变为四氢吡喃氧基吡啶衍生物。14 被证明在 KRAS 突变异种移植模型中具有溶解性、激酶选择性和疗效。

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